90 lines
4.1 KiB
Bash
90 lines
4.1 KiB
Bash
#!/bin/bash
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./xmlchange CLM_USRDAT_NAME=PLUMBER2
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./xmlchange DATM_MODE=1PT
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# Set data forcing data to future scenario so will have data from 2018 to present-day
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./xmlchange DATM_PRESAERO=SSP3-7.0
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./xmlchange DATM_CO2_TSERIES=SSP3-7.0
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./xmlchange DATM_PRESNDEP=SSP3-7.0
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# Explicitly set the MPI library to mpi-serial so won't have the build/run complexity of a full MPI library
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./xmlchange MPILIB=mpi-serial
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# Explicitly set PIO Type to NETCDF since this is a single processor case (should already be set this way)
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./xmlchange PIO_TYPENAME=netcdf
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#
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compset=`./xmlquery COMPSET --value`
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CLM_USRDAT_NAME=`./xmlquery CLM_USRDAT_NAME --value`
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TEST=`./xmlquery TEST --value`
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# For a transient case run the whole length and don't cycle
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if [[ $compset =~ ^HIST ]]; then
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# Number of months that can be run for the full transient case
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if [[ $TEST != "TRUE" ]]; then
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./xmlchange STOP_OPTION="nyears"
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fi
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# TODO, makde this accurate for plumber2
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./xmlchange CLM_NML_USE_CASE="2018-PD_transient"
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# TODO, modify for postAD runs in tower script? Remove from usermods?
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./xmlchange CLM_FORCE_COLDSTART=off
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./xmlchange CALENDAR=GREGORIAN
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echo "! this allows for large h1 data files, regardless or run length " >> user_nl_clm
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echo "hist_nhtfrq = 0,1" >> user_nl_clm
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echo "hist_mfilt = 1,438000" >> user_nl_clm
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echo " " >> user_nl_clm
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echo "CLM_USRDAT.PLUMBER2:taxmode=extend" >> user_nl_datm_streams
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echo "CLM_USRDAT.PLUMBER2:dtlimit=1e30" >> user_nl_datm_streams
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else
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# TODO, set this for spinup in BGC and SP cases
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./xmlchange STOP_OPTION="nyears"
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./xmlchange STOP_N=5
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./xmlchange CLM_NML_USE_CASE="2000_control"
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./xmlchange CLM_FORCE_COLDSTART=on
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./xmlchange CALENDAR=NO_LEAP
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echo "CLM_USRDAT.PLUMBER2:taxmode=cycle" >> user_nl_datm_streams
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echo "CLM_USRDAT.PLUMBER2:dtlimit=30" >> user_nl_datm_streams
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fi
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# If needed for SP simulations: & set history file variables
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if [[ $compset =~ .*CLM[0-9]+%[^_]*SP.* ]]; then
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echo "! using LAI streams for SP cases" >> user_nl_clm
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echo "use_lai_streams = .true." >> user_nl_clm
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echo "lai_mapalgo = 'nn'" >> user_nl_clm
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echo "stream_meshfile_lai='none'" >> user_nl_clm
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if [[ $TEST != "TRUE" ]]; then
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./xmlchange STOP_OPTION=nyears
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fi
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echo "! h1 output stream for SP case" >> user_nl_clm
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if [[ $compset =~ ^HIST ]]; then
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echo "lai_dtlimit=1e30" >> user_nl_clm
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echo "" >> user_nl_clm
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echo "! h1 output stream for transient SP case" >> user_nl_clm
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echo "hist_fincl2 = 'FSA','FIRA','EFLX_LH_TOT','FSH','FGR12','FGR','TSKIN','FSR','FSDS',
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'SNOFSRVD','SNOFSRND','SNOFSRVI','SNOFSRNI','FSNO','TSOI','SNO_T','RAIN','SNOW',
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'QVEGT','QVEGE','QSOIL','QRUNOFF','QOVER','QH2OSFC','QDRAI','QDRAI_PERCH',
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'SNO_EXISTENCE','QSNOMELT','H2OCAN','H2OSNO','SNOCAN','SOILICE','SOILLIQ',
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'SOILWATER_10CM','TWS','SNOWLIQ','SNOWDP','RH2M','TSA','FLDS','Q2M','PBOT','TLAI',
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'WIND','FIRE','FCTR','FCEV','FGEV','FSM','COSZEN','H2OSOI','BTRANMN','TV','RSSUN',
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'RSSHA','FSH_G','RHAF','RH_LEAF','RH','T10','TG','SABG','SABV','FPSN','TBOT','TAUX',
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'TAUY','QSNOEVAP','QFLX_SOLIDEVAP_FROM_TOP_LAYER','QFLX_SNOW_DRAIN','H2OSFC','FPSN'" >> user_nl_clm
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else
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echo "lai_dtlimit=30." >> user_nl_clm
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echo "" >> user_nl_clm
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fi
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echo " " >> user_nl_clm
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else # for BGC cases
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if [[ $compset =~ ^HIST ]]; then
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echo "! h1 output stream for transient BGC case" >> user_nl_clm
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echo "hist_fincl2 = 'AR','ELAI','FCEV','FCTR','FGEV','FIRA','FSA','FSH','GPP','H2OSOI',
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'HR','SNOW_DEPTH','TBOT','TSOI','SOILC_vr','FV','NET_NMIN_vr','EFLX_LH_TOT',
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'FGR12','FGR','TSKIN','FSR','FSDS','SNOFSRVD','SNOFSRND','SNOFSRVI','SNOFSRNI',
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'FSNO','SNO_T','RAIN','SNOW','QVEGT','QVEGE','QSOIL','QRUNOFF','QOVER','QH2OSFC',
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'QDRAI','QDRAI_PERCH','SNO_EXISTENCE','QSNOMELT','H2OCAN','H2OSNO','SNOCAN','SOILICE',
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'SOILLIQ','SOILWATER_10CM','TWS','SNOWLIQ','SNOWDP','RH2M','TSA','FLDS','Q2M','PBOT',
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'TLAI','WIND','FIRE','FSM','COSZEN','BTRANMN','TV','RSSUN','RSSHA','FSH_G','RHAF',
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'RH_LEAF','RH','T10','TG','SABG','SABV','TBOT','TAUX','TAUY','QSNOEVAP','H2OSFC'" >> user_nl_clm
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echo "" >> user_nl_clm
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fi
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fi
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