Tag Who Date Summary ============================================================================================================================ ctsm5.2.003 samrabin 05/02/2024 Merge b4b-dev ctsm5.2.002 glemieux 04/26/2024 FATES default allometry parameter file update ctsm5.2.001 erik 04/22/2024 Merge b4b-dev ctsm5.2.0 many 04/20/2024 New mksurfdata_esmf tool to create new surface datasets that are in place ctsm5.1.dev176 afoster 04/04/2024 Merge b4b-dev ctsm5.1.dev175 slevis 03/21/2024 merge-b4bdev-20240321 ctsm5.1.dev174 olyson 03/14/2024 Improve vegetation health at high latitudes ctsm5.1.dev173 rgknox 03/13/2024 New FATES namelist variable: fates_history_dimlevel ctsm5.1.dev172 erik 03/12/2024 Merge b4b-dev ctsm5.1.dev171 olyson 03/01/2024 Set initial t_soisno=272 for soils and 274K for urban road ctsm5.1.dev170 samrabin 02/28/2024 Add hillslope hydrology ctsm5.1.dev169 samrabin 02/22/2024 Merge b4b-dev ctsm5.1.dev168 slevis 02/16/2024 Remove a source of negative snocan in CanopyFluxesMod ctsm5.1.dev167 samrabin 02/08/2024 Delete _FillValue and history from parameter files ctsm5.1.dev166 multiple 01/24/2024 BFB merge tag ctsm5.1.dev165 slevis 01/19/2024 Turn Meier2022, tillage, residue removal on for ctsm5.1, fix #2212 ctsm5.1.dev164 rgknox 01/17/2024 Compatibility and tests for FATES 2-Stream ctsm5.1.dev163 samrabin 01/10/2024 Add tillage and residue removal ctsm5.1.dev162 samrabin 01/05/2024 Improvements to processing of crop calendar files ctsm5.1.dev161 samrabin 01/04/2024 Refactor 20-year running means of crop GDD accumulation ctsm5.1.dev160 glemieux 12/30/2023 FATES landuse version 1 ctsm5.1.dev159 multiple 12/12/2023 Various BFB fixes and updates ctsm5.1.dev158 erik 12/07/2023 First tag with testing moved to Derecho and working PE-layouts for Derecho ctsm5.1.dev157 samrabin 12/05/2023 Update Externals to work on Derecho ctsm5.1.dev156 samrabin 11/30/2023 Do not use Meier roughness by default. ctsm5.1.dev155 samrabin 11/27/2023 Use baset_latvary parameters ctsm5.1.dev154 slevis 11/22/2023 New params files with changes for Meier roughness, MIMICS, and SNICAR, and changes to leafcn and k*_nonmyc ctsm5.1.dev153 afoster 11/17/2023 Call new FATES-side FatesReadParameters ctsm5.1.dev152 multiple 11/14/2023 Mv tools to /python and add tests; add snow_thermal_cond_method; a few fixes / refactors ctsm5.1.dev151 rgknox 11/11/2023 Fixes to FATES long run restarts ctsm5.1.dev150 rgknox 11/06/2023 FATES API fix to support future fates npp-fixation coupling, and urgent coupling fixes with E3SM. ctsm5.1.dev149 samrabin 11/03/2023 Rearrange leaf/stem "harvest" and fix soil gas diffusivity ctsm5.1.dev148 samrabin 11/03/2023 Add GRAINN outputs ctsm5.1.dev147 samrabin 10/30/2023 Add sowing window input files ctsm5.1.dev146 glemieux 10/24/2023 FATES cross-grid seed dispersal ctsm5.1.dev145 slevis 10/19/2023 SNICAR snow albedo scheme updates ctsm5.1.dev144 samrabin 10/19/2023 Remove a deprecated shr_mpi_bcast call ctsm5.1.dev143 rgknox 10/13/2023 Zeroing of wood product fluxes on fates columns ctsm5.1.dev142 samrabin 09/19/2023 Merge 5 bit-for-bit pull requests ctsm5.1.dev141 slevis 09/13/2023 Change small snocan to zero ctsm5.1.dev140 afoster 09/12/2023 add lai_streams capability for FATES ctsm5.1.dev139 slevis 08/28/2023 Fix problems uncovered by nag -nan tests ctsm5.1.dev138 slevis 08/25/2023 Refactor max_patch_per_col and maxsoil_patches loops ctsm5.1.dev137 slevis 08/23/2023 Surface roughness modifications ctsm5.1.dev136 multiple 08/22/2023 Change order of history fields to improve performance on derecho ctsm5.1.dev135 slevis 08/21/2023 Rename hist fields to track them down more easily ctsm5.1.dev134 rgknox 08/16/2023 Migration of FATES to share normal soil BGC call sequence and functionality ctsm5.1.dev133 glemieux 08/09/2023 FATES API update to facilitate fates refactor ctsm5.1.dev132 slevis 08/04/2023 Add parameterization to allow excess ice in soil and subsidence ctsm5.1.dev131 samrabin 07/27/2023 Enable prescribed crop calendars ctsm5.1.dev130 glemieux 07/09/2023 FATES parameter file and test definition update ctsm5.1.dev129 erik 06/22/2023 NEON fixes for TOOL and user-mods, add SP for NEON, some history file updates, black refactor for buildlib/buildnml ctsm5.1.dev128 glemieux 06/01/2023 Update FATES tests to double precision ctsm5.1.dev127 sacks 05/19/2023 Fix nuopc cplhist test ctsm5.1.dev126 jpalex 05/18/2023 Clean up some loops in UrbanTimeVarType ctsm5.1.dev125 jpalex 05/17/2023 Added cache for clock step_size in clm_time_manager.F90 ctsm5.1.dev124 erik 05/09/2023 Initialization memory update, new surface datasets for new grids, add option for running NEON with PRISM data ctsm5.1.dev123 sacks 05/01/2023 Updates needed for pFUnit 4 and other externals updates ctsm5.1.dev122 sacks 04/23/2023 Rework handling of evaporation constraint in SoilFluxes ctsm5.1.dev121 glemieux 04/05/2023 Changes soil moisture initialization logic for FATES ctsm5.1.dev120 sacks 03/25/2023 Update externals and minor fixes ctsm5.1.dev119 slevis 03/16/2023 Allow gross unrepresented land use transition (PR #309) ctsm5.1.dev118 slevis 02/05/2023 Use conda environment rather than ncar_pylib with the fsurdat_modifier system test ctsm5.1.dev117 afoster 02/02/2023 Updates to facilitate running FATES at NEON sites ctsm5.1.dev116 erik 01/26/2023 Small answer changes with bug fixes, zetamaxstable=2 for BHS, new single point fsurdat files ctsm5.1.dev115 rgknox 12/02/2022 API compatability with FATES V2 nutrient dynamics ctsm5.1.dev114 multiple 11/19/2022 Some NEON updates fixing AG sites, update MOSART, small fixes ctsm5.1.dev113 multiple 10/28/2022 Fix some compsets; add only clauses for ESMF use statements ctsm5.1.dev112 multiple 10/15/2022 Rework fates test definitions and add new fates tests ctsm5.1.dev111 multiple 10/05/2022 Fixes for NEON cases ctsm5.1.dev110 slevis 09/26/2022 Introduction of modify_meshes tool for use in I-cases and F-cases ctsm5.1.dev109 slevis 09/26/2022 If not MIMICS, do not output certain MIMICS history fields ctsm5.1.dev108 afoster 09/08/2022 Connect ozone from atmosphere ctsm5.1.dev107 afoster 09/07/2022 Update Externals ctsm5.1.dev106 multiple 08/04/2022 Reuse some files generated in initialization when rerunning ctsm5.1.dev105 slevis 07/26/2022 make interfaces more similar between fsurdat_modifier and subset_data tools ctsm5.1.dev104 glemieux 07/15/2022 Update to FATES history names and machine configuration ctsm5.1.dev103 sacks 07/12/2022 Fix accumulation variables when changing model time step ctsm5.1.dev102 sacks 07/11/2022 Fix LILAC interface to PIO ctsm5.1.dev101 samrabin 07/11/2022 Fix winter wheat sowing window bugs ctsm5.1.dev100 erik 07/05/2022 Start bringing in matrixcn overall options and sparse matrix multiplier code, misc updates ctsm5.1.dev099 rgknox 06/21/2022 Enabling FATES control over the number of patches on the natural land unit ctsm5.1.dev098 swensosc 05/20/2022 Correct perched water table calculation ctsm5.1.dev097 sacks 05/20/2022 Update ccs_config to fix issue on izumi and maybe elsewhere ctsm5.1.dev096 erik 05/18/2022 Fix a few glitches from the last tag ctsm5.1.dev095 erik 05/09/2022 Turn soil BGC off for FATES-SP mode, externals updates, FatesSP user-mod directory and compset ctsm5.1.dev094 negins 05/06/2022 subset_data allows zeroing out nonveg landunits without any dompft selected ctsm5.1.dev093 slevis 05/03/2022 Modifications for FATES-MIMICS to work ctsm5.1.dev092 sacks 04/29/2022 Refactor NutrientCompetition / CNAllocation to provide hooks for AgSys ctsm5.1.dev091 rgknox 04/22/2022 clm decomp method is now passed to fates to enabled mimics coupling ctsm5.1.dev090 samrabin 03/31/2022 Fix misleading name of "gddplant" ctsm5.1.dev089 sacks 03/31/2022 For CLM45 apply peaklai to aleaf in grainfill ctsm5.1.dev088 samrabin 03/28/2022 Add outputs for annual crop sowing and harvest dates ctsm5.1.dev087 sacks 03/24/2022 Reduce aux_clm testing cost ctsm5.1.dev086 negins 03/22/2022 Updates necessary for NEON v2 files and server updates ctsm5.1.dev085 sacks 03/16/2022 Expand crop reproductive pools; remove some unused options ctsm5.1.dev084 glemieux 03/15/2022 FATES parameter file updated to align with clm pft optical parameters ctsm5.1.dev083 multiple 03/08/2022 Implement PCT_URBAN_MAX to minimize dynamic urban memory ctsm5.1.dev082 slevis 02/28/2022 Replace dom_nat_pft with dom_plant to enable crop in fsurdat_modifier tool ctsm5.1.dev081 swensosc 02/24/2022 Do not subtract irrigation from QRUNOFF diagnostic ctsm5.1.dev080 sacks 02/24/2022 Use avg days per year when converting param units ctsm5.1.dev079 sacks 02/24/2022 Changes to CropPhenology timing ctsm5.1.dev078 sacks 02/24/2022 Rework single-point testing ctsm5.1.dev077 rgknox 02/22/2022 Updates to FATES API, including removal of patch dimensions from fates history and using soil instead of ground layers for fates history ctsm5.1.dev076 negins 02/18/2022 updating subset_data.py script and move to the Python package. ctsm5.1.dev075 erik 02/16/2022 Small answer changes: urban ventilation, fire-emission, irrigate off when not crop, fix two SSP ndep files ctsm5.1.dev074 slevis 02/02/2022 Introduce vert. resolved MIMICS as new method to solve below ground decomp. ctsm5.1.dev073 sacks 01/25/2022 Some fixes for Gregorian calendar ctsm5.1.dev072 negins 01/17/2022 mksurfdat toolchain part 1: gen_mksurf_namelist ctsm5.1.dev071 glemieux 01/16/2022 Small changes to enable new fates dimension and update fates tag ctsm5.1.dev070 multiple 01/10/2022 Update externals, remove need for LND_DOMAIN_FILE and LND_DOMAIN_PATH, etc. ctsm5.1.dev069 multiple 12/15/2021 Implement dynamic (transient) urban capability ctsm5.1.dev068 multiple 12/13/2021 Adding fsurdat_modifier tool ctsm5.1.dev067 jedwards 12/13/2021 NEON UI update, externals updates, small miscellanouse fixes ctsm5.1.dev066 rgknox 12/04/2021 API change with FATES to enable running means inside fates, includes passing in of model timestep ctsm5.1.dev065 glemieux 12/02/2021 Refactor static fire data input by moving variables into fire_base_type from cnveg_state_type ctsm5.1.dev064 afoster 11/29/2021 Updates to facilitate FATES history variable overhaul ctsm5.1.dev063 glemieux 11/23/2021 Provide access to the fraction of canopy covered by snow variable to fates ctsm5.1.dev062 erik 11/19/2021 Make NUOPC the default driver rather than MCT ctsm5.1.dev061 mvertens 10/19/2021 Changes needed to get aux history output with cmeps ctsm5.1.dev060 glemieux 10/18/2021 Izumi aux_clm test fixes for fates testmods ctsm5.1.dev059 glemieux 10/13/2021 Update fates tests and list for diversity and coverage ctsm5.1.dev058 erik 10/07/2021 Some miscellaneous small answer changes ctsm5.1.dev057 samrabin 09/20/2021 Consolidate duplicated crop phenology code ctsm5.1.dev056 glemieux 09/17/2021 FATES Satellite Phenology mode implemented ctsm5.1.dev055 slevis 09/10/2021 Updates to master_list_file.rst ctsm5.1.dev054 erik 09/02/2021 New parameters on paramsfile, many bit-for-bit changes, new history fields for IWUELN,VPD_2M, allow Medlyn Photosynthesis for non-PHS cases, fixes to HumanStressIndex ctsm5.1.dev053 sacks 08/13/2021 Add Antarctica compset and change min_snow_to_keep ctsm5.1.dev052 negins 08/11/2021 Wrapper script for running NEON sites, and some NEON updates ctsm5.1.dev051 multiple 08/06/2021 New LUNA-specific ozone stress option ctsm5.1.dev050 sacks 08/02/2021 Improve and document method for getting diagnostics on a problem point ctsm5.1.dev049 jedwards 07/26/2021 Update externals, NEON updates, fix stop_option=date, move neon niwo test to match user_mods, local time option ctsm5.1.dev048 slevis 07/10/2021 Make certain history fields descriptive inst. of labeling by number ctsm5.1.dev047 mvertens 07/08/2021 Start bounds at 1; remove references to MCT ctsm5.1.dev046 rgknox 07/02/2021 Updating external fates has to tag sci.1.46.2_api.16.1.0 ctsm5.1.dev045 slevis 06/29/2021 Include CWD in heterotrophic respiration ctsm5.1.dev044 mvertens 06/24/2021 New stream functionality when using NUOPC or LILAC ctsm5.1.dev043 slevis 06/03/2021 Refactor of CascadeBGC code in preparation for MIMICS ctsm5.1.dev042 erik 05/28/2021 Small answer changes for double precision constants and soil limits ctsm5.1.dev041 rgknox 05/27/2021 bring FATES API up to sci.1.46.0_api.16.0.0 (methane and cn hooks) ctsm5.1.dev040 slevis 05/20/2021 mksurfdata_map: replace SRC files of various masks with SRC files w no mask ctsm5.1.dev039 jedwards 05/18/2021 Add NEON sites ctsm5.1.dev038 erik 04/27/2021 Bring in minor changes from the cesm2.2.0 release tag release-cesm2.2.01 erik 09/02/2020 Fix clm4_5 initial conditions ctsm5.1.dev037 slevis 04/23/2021 Correct vertical interpolation in init_interp when soil thicknesses change ctsm5.1.dev036 glemieux 04/21/2021 FATES tag update and snow occlusion of LAI fix ctsm5.1.dev035 sacks 04/20/2021 Misc bfb enhancements and fixes ctsm5.1.dev034 erik 04/19/2021 Bring in Arctic changes to LUNA from Leah Birch ctsm5.1.dev033 mvertens 04/10/2021 Remove unnecessary settings of nextsw_cday ctsm5.1.dev032 mvertens 04/10/2021 Fix bugs in co2 from atmosphere ctsm5.1.dev031 jedwards 04/10/2021 Update externals and fixes for nuopc threading ctsm5.1.dev030 erik 03/31/2021 New single column functionality for the NUOPC cap ctsm5.1.dev029 mvertens 03/18/2021 Rework domain initialization for nuopc ctsm5.1.dev028 swensosc 03/17/2021 Change limitation of top layer evaporation/sublimation ctsm5.1.dev027 sacks 03/15/2021 Update cime and other externals; includes switch to pio2 ctsm5.1.dev026 sacks 03/08/2021 Change f10 tests to use mg37 mask ctsm5.1.dev025 sacks 02/23/2021 Refactor ozone code, and misc. small fixes ctsm5.1.dev024 slevis 02/20/2021 Grid cell-level error check for H2O ctsm5.1.dev023 erik 02/11/2021 Calculate leaf biomass for non-woody PFTS, and a few other small answer changes ctsm5.1.dev022 glemieux 02/05/2021 Merge fates_main_api into ctsm master ctsm5.1.dev021 erik 01/12/2021 Add option for biomass heat storage (BHS) to clm5_1 physics ctsm5.1.dev020 erik 12/30/2020 Potential roundoff changes in preparation for bio-mass heat storage option ctsm5.1.dev019 sacks 12/19/2020 Fix ndep from coupler ctsm5.1.dev018 slevis 12/08/2020 Add ACTIVE (T/F) column to master hist fields table and alphabetize ctsm5.1.dev017 slevis 11/17/2020 Write history fields master list to separate optional file ctsm5.1.dev016 multiple 11/17/2020 Updates for nuopc ctsm5.1.dev015 sacks 11/13/2020 A few small fixes ctsm5.1.dev014 dll/oles 11/07/2020 Grass/crop snow burial fraction fix, and some other fixes ctsm5.1.dev013 jedwards 11/04/2020 Allow pnetcdf for vector history files ctsm5.1.dev012 oleson/s 11/03/2020 Allow nlevgrnd < nlevurb ctsm5.1.dev011 sacks 11/02/2020 Change CISM2%NOEVOLVE compsets to use SGLC; documentation updates ctsm5.1.dev010 sacks/je 10/23/2020 Fix reading netcdf variable into a different data type ctsm5.1.dev009 negins 10/21/2020 BFB changes for Perturbed Parameter Ensemble and Hydraulic redistribution ctsm5.1.dev008 erik 10/07/2020 Two answer changes: Clm45/50/51 with crop, and for 2000Clm51 ctsm5.1.dev007 sacks 10/06/2020 CNFire: btran2 fixes and general cleanup ctsm5.1.dev006 sacks 10/03/2020 Call correct routine to calculate btran2 for CNFireLi2021 ctsm5.1.dev005 sacks 10/02/2020 Answer changing bug fixes for clm51: fire and organic_frac_squared ctsm5.1.dev004 oleson 09/30/2020 Improve robustness of onset and offset counters when changing dt ctsm5.1.dev003 ivanderk 09/29/2020 Add capability for dynamic lakes ctsm5.1.dev002 slevis 09/25/2020 Reduce duplication between caps ctsm5.1.dev001 erik 09/23/2020 Start the clm5_1 physics series, with some changes to the fire model from Fang Li ctsm1.0.dev113 negins 09/08/2020 Some bit-for-bit changes needed for the Perturbed Parameter Ensemble work ctsm1.0.dev112 sacks/ww 08/28/2020 Small changes to mksurfdata_map, singlept tool and run_sys_tests ctsm1.0.dev111 erik 08/28/2020 Compsets don't use 2014 for GSWP3 forcing, LUNA prevyr changed back ctsm1.0.dev110 jedwards 08/21/2020 Fixes needed for PIO2 ctsm1.0.dev109 negins 08/20/2020 Allow for resorbtion in transition from live to dead wood N ctsm1.0.dev108 erik 08/19/2020 Update default PE layouts for new SE/FV3 grids ctsm1.0.dev107 erik 08/10/2020 Answer changes needed for CESM2.2.0 ctsm1.0.dev106 erik 08/06/2020 Bit-for-bit updates for the CESM2.2.0 release release-clm5.0.34 erik 04/20/2020 Update doc for release-clm5.0 (SKIPPED), and fix issues with no-anthro surface dataset creation release-clm5.0.33 erik 04/07/2020 SKIPPED ON MASTER -- Turn irrigation on for 2300 SSP extensions release-clm5.0.32 erik 04/02/2020 SKIPPED ON MASTER -- Extensions to 2300 for SSP5-8.5,SSP5-3.4, and SSP1-2.6 release-clm5.0.31 erik 03/29/2020 Bring raw 2100-2300 extension (SKIPPED), some other misc. changes ctsm1.0.dev105 erik/fis 07/23/2020 Bring in some new SE grids for CAM as well as initial condition files for them ctsm1.0.dev104 sacks 07/06/2020 Add LILAC ctsm1.0.dev103 slevis 06/29/2020 Gridcell-level error-check for methane (CH4) ctsm1.0.dev102 erik/ole 06/26/2020 Some important fixes for LUNA in clm5_0, and small urban issue in clm5_0 ctsm1.0.dev101 ole/erik 06/17/2020 Changes from Keith to bring a list of variables to the parameter file ctsm1.0.dev100 sacks 06/09/2020 Deallocate memory after running init_interp ctsm1.0.dev099 sacks 06/08/2020 Update cime, needed for izumi machine updates ctsm1.0.dev098 jet/erik 05/28/2020 Bring in GFDL fv3 cubed sphere grids C24, C48, C96, C192, C384 ctsm1.0.dev097 ycheng 05/25/2020 Add two bioenergy crops (switchgrass and miscanthus) ctsm1.0.dev096 slevis 05/21/2020 Gridcell-level balance checks for carbon and nitrogen ctsm1.0.dev095 sacks 05/21/2020 Update cime and cmeps externals; rework initialization of CNFire object ctsm1.0.dev094 sacks 05/15/2020 Minor bug fixes needed for latest cime ctsm1.0.dev093 erik 05/01/2020 Bring in changes from release-clm5.0 branch to master release-clm5.0.30 erik 01/21/2020 Update FATES to sci.1.30.0_api.8.0.0 release-clm5.0.29 erik 11/19/2019 Some answer changes needed for prescribed soil-moisture and clm4_5 defaults (1850-ndep, and urbantv settings) release-clm5.0.28 erik 11/14/2019 Several bit-for-bit fixes especially around soil-moisture streams release-clm5.0.27 erik 08/13/2019 Add presoribed soil moisture streams as an option, and a few fixes release-clm5.0.26 sacks 07/29/2019 Add a CN precision control call to fix problems related to small negative values release-clm5.0.25 erik 05/29/2019 Change two files from NetCDF-4 format to NetCDF-3 (because some machines have trouble with NetCDF-4 in pnetcdf) release-clm5.0.24 erik 05/22/2019 Correct ndep end year for SSPs, 2-degree CMIP6WACCMDECK with C-isotopes off, fixes mksurfdata for high resolution release-clm5.0.23 erik 05/15/2019 Update cime to bring in CO2 transient files for the CMIP6 SSP's as well as presaero for three of them release-clm5.0.22 erik 05/08/2019 Fix carbon isotope bug that caused wrong answers for isotopes under transient land-use change release-clm5.0.21 erik 05/03/2019 New ndep files, update fates, fix some issues release-clm5.0.20 erik 03/12/2019 Update all fsurdat files and bring in files for future scenarios, remove CMIP5 rcp options, bring in some bug fixes release-clm5.0.19 erik 03/08/2019 SKIPPED ON MASTER -- Update cime version release-clm5.0.18 erik 02/13/2019 Add NoAnthro compset, reduce fields on fsurdat in mksurfdata_map, initial add of tools/contrib directory release-clm5.0.17 sacks 01/23/2019 History fields for vertically-resolved sums of soil C and N, and minor fixes release-clm5.0.16 erik 01/15/2019 PtVg and ssp_rcp future scenario options and Antarctica wetlands fix to mksurfdata, and option to dribble crop harvest XSMRPOOL flux to atmosphere release-clm5.0.15 sacks 12/06/2018 SKIPPED ON MASTER -- Option for rain-to-snow release-clm5.0.14 erik 11/29/2018 Update cime and fix surface dataset for f05 1850 non-crop case release-clm5.0.13 erik 11/14/2018 Update externals with new CO2/presearo/rtm/mosart, add science_support, change testing release-clm5.0.12 erik 11/03/2018 New IC files for clm45/clm50 coupled cases, add 2010 compset (IC FILES UPDATE SKIPPED ON MASTER) ctsm1.0.dev092 erik 04/27/2020 Update cime to version in cesm2_2_beta04 ctsm1.0.dev091 sacks 04/24/2020 Increase tolerance on near-zero truncation for a snow state update ctsm1.0.dev090 negins 04/23/2020 Refactoring banded diagonal matrix code in SoilTemperature module ctsm1.0.dev089 sacks 04/07/2020 Bring documentation source to master ctsm1.0.dev088 sacks 04/07/2020 Fix bug in snow aerosol numerics (causes occasional HUGE aerosol values) ctsm1.0.dev087 sacks 04/06/2020 Change hard-coded soil layers in phenology to use a target depth ctsm1.0.dev086 mvertens 03/19/2020 Updates to NUOPC cap and minor fixes to ncdio_pio ctsm1.0.dev085 sacks 03/16/2020 Update cime ctsm1.0.dev084 negins 02/19/2020 Bounds assertion for C isotopes when threading is on ctsm1.0.dev083 negins 02/06/2020 Some BFB Fixes: Resolve issues #683, # 874, #878, # 885, # 745, #838 ctsm1.0.dev082 oleson 02/01/2020 Rename variables to avoid confusion; fix QSNOEVAP diagnostic ctsm1.0.dev081 slevis 01/13/2020 Speed up restart writes ctsm1.0.dev080 sacks 12/02/2019 Update externals, minor fixes to work with latest cime, get nuopc cap working ctsm1.0.dev079 sacks 11/04/2019 Change a few uses of shr_kind ctsm1.0.dev078 oleson 10/31/2019 Fix rootr calculation with use_hydrstress true ctsm1.0.dev077 sacks 10/27/2019 Consistently use frac_sno_eff rather than frac_sno in qg calculations ctsm1.0.dev076 sacks 10/25/2019 Set frac_sno_eff=0 if frac_sno is 0; avoid unnecessary calls to QSat ctsm1.0.dev075 sacks 10/25/2019 Lakes: Adjust frac_sno after updating 0-layer snow pack for dew & sublimation ctsm1.0.dev074 sacks 10/23/2019 For lakes: when reading finidat, set frac_sno=1 if h2osno_total > 0 ctsm1.0.dev073 sacks 10/22/2019 Fix bug in calculation of dqgdT ctsm1.0.dev072 mvertens 10/15/2019 Add NUOPC cap ctsm1.0.dev071 sacks 10/11/2019 Split CanopyTemperature into separate pieces ctsm1.0.dev070 sacks 10/09/2019 Fix for writing 0-d variables with PIO2 ctsm1.0.dev069 sacks 10/07/2019 Misc. code cleanup and minor bug fixes ctsm1.0.dev068 sacks 09/30/2019 Add water tracers to CombineSnowLayers, DivideSnowLayers, ZeroEmptySnowLayers ctsm1.0.dev067 erik 09/26/2019 Add config_archive.xml to CTSM cime_config -- no testing ctsm1.0.dev066 sacks 09/20/2019 Add water tracers to SnowCapping ctsm1.0.dev065 sacks 09/14/2019 Add water tracers to SnowWater ctsm1.0.dev064 slevis 09/09/2019 User defined top-two snow layers ctsm1.0.dev063 erik 09/05/2019 Two answer changing fixes (fire, DWT_SLASH) and fix for urban streams for Clm45 ctsm1.0.dev062 sacks 09/03/2019 Move hobart tests to izumi ctsm1.0.dev061 erik 09/01/2019 Simple b4b fixes: new params file, remove override_nsrest/anoxia_wtsat, DV deprecated ctsm1.0.dev060 sacks 08/29/2019 In SnowWater, truncate small h2osoi residuals ctsm1.0.dev059 sacks 08/24/2019 Continue adding water tracers to LakeHydrology ctsm1.0.dev058 slevis 08/22/2019 Soil texture interpolation bug-fix ctsm1.0.dev057 sacks 08/20/2019 Fix frac_sno bugs ctsm1.0.dev056 sacks 08/16/2019 Start adding water tracers to LakeHydrology, and related refactoring ctsm1.0.dev055 sacks 08/06/2019 Modularize snow cover fraction method ctsm1.0.dev054 sacks 08/02/2019 Fix interpolation of surfdat soil layers so we can use interpolation for 10SL case ctsm1.0.dev053 slevis 08/01/2019 Soil layer definition clean-up and user-defined option ctsm1.0.dev052 sacks 07/22/2019 Fix rare soil color bug in mksurfdata_map ctsm1.0.dev051 sacks 07/19/2019 Update water tracers for remainder of first stage of hydrology ctsm1.0.dev050 slevis 07/15/2019 dz --> dz_lake bug-fix in LakeTemperatureMod.F90 line 960 ctsm1.0.dev049 erik 06/23/2019 Update mosart and intel to intel-19 on cheyenne ctsm1.0.dev048 erik 06/23/2019 Updates for buildlib changes and cime and externals updates ctsm1.0.dev047 sacks 06/16/2019 Fix negative snow compaction during snow melt ctsm1.0.dev046 sacks 06/15/2019 Separate the two uses of h2osno ctsm1.0.dev045 sacks 06/06/2019 Recalculate h2osno for the sake of SnowCapping ctsm1.0.dev044 sacks 06/06/2019 Make wetland snow resetting behavior more explicit ctsm1.0.dev043 erik 06/05/2019 Fix FUN bug (frac_ideal_C_use was backwards in regard to delta_CN), and replace Ball-Berry mbbopt with the CLM4.5 version ctsm1.0.dev042 slevis 05/21/2019 Rename, correct, and simplify parameters dewmx and sno_stor_max ctsm1.0.dev041 sacks 05/17/2019 Add water tracers to CanopyHydrologyMod ctsm1.0.dev040 slevis 05/03/2019 Move some hard-coded parameters from code to params.nc file ctsm1.0.dev039 sacks 05/01/2019 Remove excess canopy liquid/snow regardless of temperature ctsm1.0.dev038 sacks 05/01/2019 Support for NWP configuration, NLDAS grid and NLDAS datm forcing ctsm1.0.dev037 sacks 04/29/2019 Change year alignment for present-day I compsets ctsm1.0.dev036 erik 04/26/2019 Fix carbon isotope bug that caused wrong answers for isotopes under transient land-use change ctsm1.0.dev035 sacks 04/22/2019 Change h2ocan to a purely diagnostic variable ctsm1.0.dev034 sacks 04/20/2019 Change clm4_5: Use Justin Perket snow on vegetation ctsm1.0.dev033 slevis 04/11/2019 Limit landunit presence with thresholds set in the namelist ctsm1.0.dev032 negins 04/08/2019 Fixing the balance check to check for possible errors over all columns/patches ctsm1.0.dev031 sacks 03/13/2019 Subtract virtual states to reduce dynbal fluxes for transient glaciers ctsm1.0.dev030 sacks 03/08/2019 Update CIME; hookup expected test fails ctsm1.0.dev029 slevis 02/26/2019 Collapse landunits to the N most dominant ctsm1.0.dev028 sacks 02/26/2019 Interpolate out-of-the-box initial conditions and remove expensive tests ctsm1.0.dev027 negins 02/19/2019 non-constant time init for soil hydrology types are moved to SoilHydrologyType.F90 ctsm1.0.dev026 slevis 02/05/2019 Collapse unmanaged PFTs to the N most dominant ctsm1.0.dev025 sacks 01/23/2019 History fields for vertically-resolved sums of soil C and N, and minor fixes ctsm1.0.dev024 slevis 01/14/2019 Remove unnecessary restart variables ctsm1.0.dev023 sacks 01/10/2019 Remove CLM4.0 ctsm1.0.dev022 sacks 01/08/2019 Set tracer version of irrigation fluxes ctsm1.0.dev021 mvr 12/26/2018 Added tracer ratio capability and included it in consistency checks ctsm1.0.dev020 sacks 12/03/2018 New options for irrigation and crop fsat ctsm1.0.dev019 sacks 11/30/2018 Rework cold start initialization of wa and zwt ctsm1.0.dev018 sacks 11/29/2018 Water tracer updates for initial things in driver loop ctsm1.0.dev017 slevis 11/28/2018 Merge the collapse2gencrop branch ctsm1.0.dev016 sacks 11/01/2018 Update cime, fix FATES DEBUG token, add script to easily run system tests ctsm1.0.dev015 sacks 10/28/2018 CMIP6 compset modifiers, usermods for typical output, and other output enhancements ctsm1.0.dev014 sacks 10/26/2018 Miscellaneous minor, bit-for-bit bug fixes ctsm1.0.dev013 erik 10/25/2018 Fix the fact that transient Bgc and SP cases had constant crop area in time ctsm1.0.dev012 erik 09/29/2018 Add snow-free fields for snowmip, fix several issues ctsm1.0.dev011 sacks 09/12/2018 Add water tracer consistency checks, and other water tracer work ctsm1.0.dev010 sacks 08/30/2018 Update cime to cime5.7.3 ctsm1.0.dev009 sacks 08/22/2018 Fix initialization of AnnET in InitAccVars ctsm1.0.dev008 erik 08/14/2018 Update 1850 ndep file and last year for streams for Historical transient cases (corresponds to release-clm5.0.05) ctsm1.0.dev007 sacks 08/05/2018 Avoid glacier dynamic landunit adjustments in first time step ctsm1.0.dev006 sacks 08/04/2018 Minor bug fixes, cleanup, documentation and enhancements ctsm1.0.dev005 sacks 08/03/2018 Rework water data types to accommodate isotopes and other tracers (skipped on release-clm5.0) ctsm1.0.dev004 erik 07/18/2018 Add some new diagnostic fields, fix a few issues, update cmip6 output (corresponds to release-clm5.0.04) ctsm1.0.dev003 erik 07/15/2018 Update cime/cism to work on upgraded hobart and with glade changes on cheyenne ctsm1.0.dev002 erik 07/06/2018 Fix NFIX flux variables so special land-units are zeroed out, tools update, add some *_MAX fields on mksurfdata_map for transient cases ctsm1.0.dev001 sacks 06/22/2018 Begin separating SoilHydrology flux calculations (this was skipped on release branch) clm5.0.dev013 erik 06/12/2018 cleanup and update cime and cism (corresponds to release-clm5.0.03) clm5.0.dev012 sacks 05/17/2018 Fixes for variable_year orbital mode (corresponds to release-clm5.0.01 and release-clm5.0.02) clm5.0.dev011 erik 05/16/2018 1850 ndep update, cism update, PE layouts, turn BFBFLAG for testing clm5.0.dev010 erik 05/15/2018 Update cime version to version in cesm2.0.beta10, changes answers for 1850 compsets because of orbit clm5.0.dev009 sacks 05/10/2018 New init_interp method clm5.0.dev008 erik 04/27/2018 With FUN subtract out soil nitrification flux of plant uptake of soil NH3 and NO3 clm5.0.dev007 erik 04/24/2018 Bring in a few answer changing things: FATES, cism updates, IC file fix, testing 1850 compset use 1850 orbit clm5.0.dev006 sacks 04/12/2018 Don't allocate memory for zero-weight natveg patches and urban clm5.0.dev005 sacks 04/10/2018 Two fixes for init_interp clm5.0.dev004 erik 04/09/2018 List of important bug fixes clm5.0.dev003 erik 03/09/2018 Bug fixes for energy imbalance associated with surface water and lakes clm5.0.dev002 sacks 02/25/2018 Add some land ice diagnostic vars needed for CMIP6 clm5.0.dev001 erik 02/14/2018 Fix LND_TUNING_MODE for fully coupled case, update some README files/PTCLM clm5.0.dev000 erik 02/05/2018 Double tag of clm5.0.000 with new naming convention, some updated documentation clm5.0.000 erik 02/05/2018 Double tag of clm4_5_18_r275 for clm5.0 release clm4_5_18_r275 erik 02/05/2018 Update initial condition files, update fates, new CMIP6 pop-dens, more lnd_tuning_mod options, updated ndep for fully coupled clm4_5_18_r274 sacks 01/30/2018 Fix auto-detection of CIME_MODEL in a standalone checkout clm4_5_18_r273 sacks 01/26/2018 Support a standalone checkout from git clm4_5_18_r272 erik 01/25/2018 Bring in latest FATES release version to CLM trunk: fates_s1.4.1_a3.0.0_rev2 clm4_5_18_r271 erik 01/20/2018 Update testlist to v2 and remove yellowstone clm4_5_18_r270 sacks 12/20/2017 Always use multiple elevation classes for glacier, even with stub glc clm4_5_18_r269 erik 12/16/2017 Move externals to version in github clm4_5_18_r268 erik 12/11/2017 Fix calculation of stomatal resistence used in dry-deposition, increase threshold of totvegc for soil decomposition to 0.1 clm4_5_18_r267 sacks 12/07/2017 Fixes to accumulator fields clm4_5_17_r266 sacks 11/27/2017 Avoid negative snow densities clm4_5_17_r265 erik 11/18/2017 Update the clm50 parameter file for better behavior with prognostic crop, and fix a bug in clm50 urban model clm4_5_17_r264 erik 11/16/2017 Changes from Dave Lawrenece on resetting soil carbon for spinup clm4_5_17_r263 erik 11/08/2017 Drydep vel. for SO2 doubled, influence of organic mater in soil calmed, max daylength not hardwired to present day clm4_5_16_r262 sacks 10/27/2017 Rename atm2lnd history fields for downscaled fields, properly turn on vic for clm45, and other minor fixes clm4_5_16_r261 sacks 10/25/2017 Add option to reset snow over glacier columns clm4_5_16_r260 erik 10/24/2017 Update paramater file for CLM50 as well as fates, fix a few issues clm4_5_16_r259 erik 10/17/2017 Update to latest cime from cesm2_0_beta07 and config_components version 3 clm4_5_16_r258 erik 10/06/2017 Revert change to fire, set n_melt_glcmec=10, update mosart to version that doesn't accumulate water in short rivers clm4_5_16_r257 erik 09/29/2017 Fix two bugs found by Hui Tang, one for Carbon isotopes and one in the fire model clm4_5_16_r256 erik 09/20/2017 Fresh snow grain radius is temperature dependent clm4_5_16_r255 erik 09/18/2017 Changes to crop and enabling Carbon isotopes for crop and some miscellaneous small changes clm4_5_16_r254 erik 09/01/2017 Update surface datasets, and point to new CMIP6 population density dataset clm4_5_16_r253 erik 08/04/2017 Check on reasonable import/export from CLM, check ndep units from input file clm4_5_16_r252 erik 07/24/2017 Update parameter file for some crop albedo issues, and fix a bug in urban albedo for nightime clm4_5_16_r251 erik 07/14/2017 Update mksurfdata_map for soil depth/color, add new mapping files clm4_5_16_r250 erik 07/13/2017 Update finundation dataset, new fsurdat files with updated soil color and soil depth, update mosart areas, fix cheyenne_gnu clm4_5_16_r249 sacks 07/06/2017 All new compsets, reworked test lists, and related fixes clm4_5_16_r248 sacks 06/28/2017 Melt most ice runoff clm4_5_16_r247 sacks 06/26/2017 New GLACIER_REGION field with CISM domain split in two clm4_5_16_r246 sacks 06/14/2017 Update to latest cime clm4_5_16_r245 sacks 06/14/2017 Only adjust glc_mec topographic heights if glc_do_dynglacier is true clm4_5_16_r244 erik 06/09/2017 Update cime and cism externals, changes answers for IG compsets, test g17 grids, fix a few issues, update mksurfdata_map clm4_5_16_r243 andre 05/23/2017 History output cleanup from Dave Lawrence clm4_5_16_r242 erik 05/21/2017 Use finundated streams for CLM50, and use ndep if it comes from cpl clm4_5_16_r241 sacks 05/16/2017 Fix ch4 subtle dependence on processor count clm4_5_16_r240 sacks 05/15/2017 Make glc_dyn_runoff_routing real-valued clm4_5_16_r239 sacks 05/13/2017 Avoid division by zero in snow WindDriftCompaction clm4_5_16_r238 andre 05/13/2017 ED is now an external library 'fates' clm4_5_16_r237 erik 05/09/2017 Latest parameter file and some changes for CLM50, CLM45-transient changes answers also clm4_5_15_r236 erik 05/01/2017 New surface datasets, and landuse.timeseries files, as well as interpolating initial conditions for almost all cases clm4_5_15_r235 sacks 04/27/2017 Zero dynbal fluxes if namelist variable is set clm4_5_15_r234 andre 04/14/2017 Update rtm and mosart externals clm4_5_15_r233 erik 04/11/2017 Pull out some constants and options to namelist clm4_5_15_r232 erik 04/05/2017 Some small changes that affect both clm4_5 and clm5_0 answers (can be considered bug fixes to clm4_5) clm4_5_14_r231 sacks 04/02/2017 Add option to reset snow pack over non-glacier columns clm4_5_14_r230 sacks 03/31/2017 Fix dynamic landunits water and energy conservation clm4_5_14_r229 erik 03/10/2017 Update cime and make some changes to drv_flds_in namelist, fix some minor bugs clm4_5_14_r228 erik 03/07/2017 Bring in changes that were accidentally dropped as part of the clm4_5_14_r226 tag clm4_5_14_r227 sacks 03/06/2017 Improve performance of dynamic landunits code clm4_5_14_r226 erik 03/02/2017 Update cime, mosart and ccism to a version that is cesm2_0_beta05 or part of beta06 clm4_5_14_r225 sacks 02/19/2017 Fix GDD accumulation in new crop columns clm4_5_14_r224 sacks 02/10/2017 Tweaks for glaciers and snow clm4_5_14_r223 sacks 02/03/2017 Handle patch-level C&N variables correctly with dynamic landunits clm4_5_14_r222 sacks 01/27/2017 Fix energy budget bug with fractional snow on glacier and wetland columns clm4_5_14_r221 sacks 01/24/2017 Change rain-snow partitioning and ice albedo for glacier columns clm4_5_14_r220 sacks 01/22/2017 Fix crop seeding clm4_5_14_r219 erik 01/21/2017 Answer changes for CLM50 for several issues that lead to dead crops clm4_5_14_r218 sacks 01/13/2017 For newly initiating columns: do not copy snow state clm4_5_14_r217 sacks 01/13/2017 Bug fix for snow radiation absorption clm4_5_14_r216 erik 01/12/2017 Fix previous broken tag clm4_5_14_r215 erik 01/12/2017 Update mksurfdata_map to work with new updated datasets from Peter, and use hand-edited surfdata/landuse.timeseries datasets for f09/f19 clm4_5_14_r214 sacks 01/03/2017 Update column states based on dwt terms between dyn_cnbal_patch and dyn_cnbal_col, and minor fixes clm4_5_14_r213 sacks 12/30/2016 Convert buildnml to python clm4_5_14_r212 sacks 12/22/2016 Bump science version number due to changes in clm4_5_13_r211 clm4_5_13_r211 sacks 12/22/2016 Apply transient land cover and harvest all at once in first time step of year clm4_5_13_r210 sacks 12/17/2016 Update cime to cesm2_0_beta04 version clm4_5_13_r209 sacks 12/11/2016 Change definition of NBP; bring back some r205 changes that were lost in r207 clm4_5_13_r208 sacks 12/10/2016 Rework irrigation; remove glc_smb logical clm4_5_13_r207 andre 12/08/2016 PHS - Calculate separate root water uptake resistances for soil and root pathways clm4_5_13_r206 andre 11/29/2016 Bugfix for Luna causing arctic to die clm4_5_13_r205 sacks 11/16/2016 Add diagnostics for snow and glacier; fix crash in Megan clm4_5_13_r204 erik 11/15/2016 A few answer changing bug fixes clm4_5_12_r203 sacks 11/10/2016 Bug fixes for snow-on-lake clm4_5_12_r202 sacks 11/09/2016 Update to cime version used in cesm2_0_beta03 clm4_5_12_r201 sacks 11/09/2016 Rework initialization of transient weights - important with use_init_interp clm4_5_12_r200 erik 11/08/2016 Latest parameter updates from simulations, ignore surface soil layer for plant hydraulic stress for greater variability in surface soil moisture clm4_5_12_r199 sacks 10/29/2016 Use CISM2 by default clm4_5_12_r198 sacks 10/20/2016 Rework mapping of irrigation from CLM to ROF clm4_5_12_r197 erik 10/14/2016 Some cleanup for plant hydraulic stress and adding more namelist parameters clm4_5_12_r196 erik 09/27/2016 Bring new cime5 to clm trunk clm4_5_12_r195 sacks 09/18/2016 Remove dependence on column weights in fire code clm4_5_12_r194 sacks 09/01/2016 Dribble annual dyn landunit adjustment fluxes; initialize water state for new crop columns clm4_5_12_r193 andre 08/30/2016 Bugfix in BalanceCheckMod: revert tolerance change and removal of endrun call introduced in r192 clm4_5_12_r192 andre 08/27/2016 ED bugfixes and initial refactoring for a standalone library clm4_5_12_r191 sacks 08/21/2016 New parameterizations for snow overburden compaction and wind drift compaction clm4_5_12_r190 sacks 08/20/2016 Fix snow capping bug clm4_5_11_r189 erik 08/18/2016 Bring in time varying streams for urban data (currently triggers AC use) clm4_5_11_r188 erik 08/05/2016 A set of small answer changing issues for both clm45 and clm50 clm4_5_10_r187 erik 07/26/2016 CLM45/50 changes: seperate carbon and water root profile, turn off undercanopystability, really turn PHS on, LUNA predict sunlit fraction N fractionation clm4_5_9_r186 sacks 07/13/2016 Initialize biogeochem balance checks AFTER column area updates clm4_5_9_r185 sacks 07/07/2016 Revert glacial melt behavior to the old treatment for mountain glaciers clm4_5_9_r184 erik 07/06/2016 CLM50 changes: Atkin form of lmr changed, new parameters and files, turn PHS on by default, new cold snow density, reseed at exit AD spinup, fix fire bug, fix npool and cpool errors clm4_5_9_r183 erik 07/02/2016 Decomposition is not water limited after reaching a field capacity parameter (maxpsi_hr) rather than only at soil saturation clm4_5_8_r182 erik 06/24/2016 Bring in option for plant hydraulic stress for clm50 clm4_5_8_r181 erik 06/17/2016 Update cime version which fixes several issues and changes answers clm4_5_8_r180 sacks 06/06/2016 Refactor dyn_cnbal_patch clm4_5_8_r179 sacks 05/27/2016 Update column-level BGC state variables with dynamic landunits clm4_5_8_r178 sacks 04/17/2016 Remove some consistency checks, and merge crop_prog with use_crop in code clm4_5_8_r177 sacks 04/14/2016 Move CN product pools to gridcell level clm4_5_8_r176 sacks 04/13/2016 Calculate active flags and filters earlier in initialization clm4_5_8_r175 sacks 04/09/2016 For glc_mec, change downscaling and where SMB is computed clm4_5_8_r174 erik 03/25/2016 Bring Rosie's respiration changes to the trunk clm4_5_8_r173 sacks 03/17/2016 Major refactor of CN Products clm4_5_8_r172 sacks 03/08/2016 Exclude land use and product pools / fluxes from CN summary diagnostics clm4_5_8_r171 erik 03/02/2016 Backout COMP_RUN_BARRIERS setting, and remove all ED tests from testlist (as they all fail) clm4_5_8_r170 sacks 02/28/2016 Add a wrapper for CN Vegetation clm4_5_8_r169 erik 02/23/2016 Add fire several fire constants to namelist, add some new clm45/50 surface datasets clm4_5_8_r168 sacks 02/20/2016 Fix zero methane production clm4_5_7_r167 sacks 02/20/2016 Fix carbon isotopes in transient runs clm4_5_7_r166 sacks 02/02/2016 Infrastructure for carbon and nitrogen conservation with dynamic landunits clm4_5_7_r165 sacks 01/29/2016 Remove fglcmask, recreate all surface datasets clm4_5_7_r164 erik 01/12/2016 Update CIME and MOSART clm4_5_7_r163 sacks 12/23/2015 Improve crop performance by allocating less memory clm4_5_7_r162 andre 12/18/2015 negative runoff updates. clm4_5_6_r161 sacks 12/17/2015 Collapse mountain glaciers to a single elevation class clm4_5_6_r160 sacks 12/11/2015 For glc_mec, get gridcell topographic height from atm clm4_5_6_r159 erik 12/10/2015 Update CIME version clm4_5_6_r158 andre 12/04/2015 misc clm 5.0 bugfixes clm4_5_6_r157 sacks 11/27/2015 Reduce memory use for init_interp clm4_5_6_r156 sacks 11/24/2015 Fix QSNWCPICE and glacial inception clm4_5_6_r155 erik 11/23/2015 Bring FUN (Fixation and Uptake of Nitrogen) code option to trunk from Mingjie, as well as latitude varying spinup from Charlie, and a fix for crop with dynamic roots from Beth clm4_5_6_r154 andre 11/18/2015 one year grain product pool clm4_5_6_r153 sacks 11/17/2015 Fix snow cover fraction bug clm4_5_5_r152 sacks 11/17/2015 Fix glc_mec energy conservation bug clm4_5_4_r151 erik 11/13/2015 Fix broken r150 tag, with bgc_spinup issue in it clm4_5_4_r150 erik 11/13/2015 Some needed answer changing fixes for: fire, disallow negative photosynthis, and reduce LAI of DBT in evergreen state clm4_5_3_r149 sacks 11/08/2015 Change cold start initialization of snow pack clm4_5_3_r148 sacks 11/07/2015 For CLM5, increase max snow depth to 20 m clm4_5_3_r147 andre 11/05/2015 swenson bedrock and coupler runoff bugfixes clm4_5_3_r146 sacks 11/04/2015 Implement vertical interpolation in init_interp clm4_5_3_r145 andre 11/03/2015 update clm50 defaults, enable clm50 crop compsets clm4_5_3_r144 sacks 10/27/2015 Better fix for bug that leads to infinite growth in snow depth clm4_5_3_r143 andre 10/22/2015 flexibleCN and luna bugfixes. clm4_5_3_r142 sacks 10/19/2015 Fix bug in initialization of 12-layer snow pack clm4_5_3_r141 sacks 10/19/2015 Fix bug that leads to infinite growth in snow depth clm4_5_3_r140 andre 10/15/2015 mosart direct to ocean runoff clm4_5_3_r139 andre 10/13/2015 dynamic roots from Beth Drewniak clm4_5_3_r138 andre 10/11/2015 new accelerated spinup and soil vertical structure clm4_5_3_r137 erik 10/09/2015 Bring in changes for fire-emissions as well tuning changes to the fire model to be used with clm5_0 clm4_5_3_r136 andre 10/08/2015 coupler field prep for mosart and externals update clm4_5_3_r135 sacks 10/06/2015 Substantial reduction in memory allocation for prognostic crops clm4_5_3_r134 sacks 10/04/2015 Fixes for transient and preindustrial crop cases clm4_5_3_r133 andre 10/02/2015 Bugfix for mksurfdata_map - add file missed by clm4_5_2_r125. clm4_5_3_r132 andre 10/02/2015 Modify soil BGC diffusion and cryoturbation code to allow for spatially variable soil thickness. clm4_5_3_r131 sacks 09/30/2015 Bring in cime3 clm4_5_3_r130 andre 09/28/2015 add namelist option to reduce lake evaporation and irrigation when river water storage falls below a threshold value, and add an additional constraint on stress deciduous leaf onset. clm4_5_3_r129 andre 09/25/2015 bump tag revision number because clm4_5_2_r128 was climate changing. clm4_5_2_r128 andre 09/24/2015 science bugfixes (not bfb) for root fraction and bedrock thermal properties clm4_5_2_r127 sacks 09/18/2015 Fix interpolation of initial conditions for glc_mec and crop <-> non-crop clm4_5_2_r126 andre 09/17/2015 New decomp_depth_efolding value for clm5.0, set as a namelist parameter instead of netcdf params file. clm4_5_2_r125 andre 09/15/2015 clm 50 hydrology updates. clm4_5_2_r124 sacks 09/13/2015 Wind-dependent snow density clm4_5_2_r123 sacks 09/10/2015 Fix some problems with pgi and nag compilers clm4_5_2_r122 sacks 09/09/2015 Update to latest cime clm4_5_2_r121 sacks 09/04/2015 Rework snow capping clm4_5_1_r120 andre 08/29/2015 CLM 5 nitrogen models Flexible CN and LUNA clm4_5_1_r119 erik 08/26/2015 Bring hobart/nag bug fixes to trunk, and fix a few bugs clm4_5_1_r118 sacks 08/05/2015 Minor rework of glc coupling fields clm4_5_1_r117 sacks 07/28/2015 Repartition rain vs. snow from atmosphere clm4_5_1_r116 sacks 07/22/2015 Rename some history fields clm4_5_1_r115 sacks 07/15/2015 Remove redundant code, rename a variable clm4_5_1_r114 sacks 07/10/2015 Update cime external, remove genf90-generated files clm4_5_1_r113 sacks 07/09/2015 Support backwards compatibility of restart variable names clm4_5_1_r112 oleson 07/01/2015 Justin Perket snow on vegetation clm4_5_1_r111 sacks 06/12/2015 Remove temporary hack to get bfb results in InitSnowLayers clm4_5_1_r110 sacks 06/12/2015 Add flexibility to have more snow layers clm4_5_1_r109 sacks 06/06/2015 Fix bug in DivideSnowLayers clm4_5_1_r108 andre 05/29/2015 Crop changes from Sam Levis clm4_5_1_r107 andre 05/19/2015 Update externals to use github version of cime1.0.7. clm4_5_1_r106 erik 05/14/2015 Fix CO2 forcing for MEGAN clm4_5_1_r105 erik 04/16/2015 Move test lists to beneath active components, change build scripts from cshell to perl, move to new cime directory structure clm4_5_1_r104 erik 01/27/2015 Update externals to latest cesm beta tag + bring in shared build for clm4_5/clm5_0 for testing clm4_5_1_r103 sacks 01/01/2015 enable transient crops clm4_5_1_r102 sacks 12/27/2014 make new input datasets to support transient crops clm4_5_1_r101 sacks 12/09/2014 rework cold start initialization for transient runs clm4_5_1_r100 sacks 12/03/2014 update pio calls to pio2 API clm4_5_1_r099 sacks 12/02/2014 add ozone stress code from Danica Lombardozzi clm4_5_1_r098 sacks 11/29/2014 update externals to cesm1_3_beta14 or beyond clm4_5_1_r097 mvertens 11/24/2014 major refactorization to introduce new soilbiogeochem data types and routines that are independent of either ED or CN datatypes clm4_5_1_r096 erik 11/19/2014 Several answer changing bug-fixes: snow grain size, lake hydrology, default settings, organic soil clm4_5_1_r095 andre 11/10/2014 N comp refactoring by Jinyun Tang (LBL) and transpiration sink isolation by Gautam Bisht (LBL) clm4_5_1_r094 sacks 11/07/2014 misc. glacier-related updates clm4_5_1_r093 sacks 11/07/2014 change cold-start snow initialization, update cism external clm4_5_1_r092 muszala 11/04/2014 bug fixes from santos that address valgrind problems. update rtm external clm4_5_1_r091 muszala 10/27/2014 update externals. fix bug so CLM runs with Intel 14x. clm4_5_1_r090 sacks 10/16/2014 modularize irrigation; do some unit test rework clm4_5_1_r089 erik 10/13/2014 Bring new urban building temperature to trunk as a clm5.0 feature as well as human-stress index calculations clm4_5_1_r088 muszala 10/01/2014 pull out ED deps. in TemperatureTypeMod, can now compile with pgi 14.7 clm4_5_1_r087 erik 09/30/2014 Fix two balance check errors, and turn abort for balance check back on to appropriate levels clm4_5_1_r086 muszala 09/25/2014 critical ED modifications from r fisher, fix bug 2043 clm4_5_1_r085 sacks 09/19/2014 replace conditionals with polymorphism for soil water retention curve clm4_5_1_r084 sacks 09/18/2014 make glc_dyn_runoff_routing spatially-varying, based on input from glc clm4_5_1_r083 muszala 09/17/2014 only update scripts and run new baselines. this due to an error in yellowstone pgi test naming (clm_aux45 changed to aux_clm45) clm4_5_1_r082 muszala 09/11/2014 Merge in a number of ED changes to address science bugs and infrastructure (partiulararly restarts) clm4_5_1_r081 mvertens 08/24/2014 major infrastructure changes and directory reorganization under src clm4_5_1_r080 erik 08/16/2014 Update externals to trunk version, allow eighth degree as a valid resolution clm4_5_1_r079 andre 07/31/2014 G. Bisht (LBL) soil temperature refactor; machines update for goldbach-intel clm4_5_1_r078 muszala 07/23/2014 add lai stream capability and the ability to run with V5 cruncep data clm4_5_1_r077 andre 07/10/2014 Refactor from Jinyun Tang (LBL) to make hydrology more modular. clm4_5_1_r076 erik 07/07/2014 Answer changes for fire code from Fang Li clm4_5_75 muszala 05/30/2014 update externals to rtm1_0_38 and esmf_wrf_timemgr_140523 clm4_5_74 sacks 05/28/2014 misc. bfb changes - see detailed summary below clm4_5_73 erik 05/28/2014 Add the stub ability for clm5_0 physics to CLM build system clm4_5_72 muszala 05/05/2014 Introduce code for Ecosystem Demography (CLM(ED)) Model clm4_5_71 sacks 05/02/2014 2-way feedbacks for glacier, veg columns compute glacier SMB, and related changes clm4_5_70 muszala 04/18/2014 bring in SHR_ASSERT macros clm4_5_69 andre 03/18/2014 start unit testing build-namelist clm4_5_68 erik 03/07/2014 Update scripts to version that turns on transient CO2 streams for transient compsets, and update CISM (changes answers) clm4_5_67 mvertens 03/06/2014 removed initSurfAlb as part of the initialization clm4_5_66 mvertens 03/03/2014 refactoring of initialization and introduction of run-time finidat interpolation clm4_5_65 mvertens 02/25/2014 Turn off MEGAN vocs when crops is running clm4_5_64 muszala 02/19/2014 fix and clean ncdio_pio.F90.in. clean clm_time_manager. update externals. clm4_5_63 sacks 02/14/2014 add some code needed for dynamic landunits; activate 0-weight veg landunit sometimes clm4_5_62 erik 02/10/2014 Get PTCLM working robustly, US-UMB test working, add CO2 streams to datm, add more consistency testing between compsets and user settings clm4_5_61 sacks 02/04/2014 add 3-d snow history fields; continue harvest past end of pftdyn timeseries clm4_5_60 andre 01/30/2014 refactor build-namelist clm4_5_59 sacks 01/22/2014 use new get_curr_yearfrac function in clm_time_manager clm4_5_58 sacks 01/22/2014 major refactor of transient pft code, in prep for dynamic landunits clm4_5_57 sacks 01/07/2014 change CNDV water conservation to use the pftdyn method clm4_5_56 sacks 01/02/2014 update scripts external to fix I20TRCLM45BGC compset clm4_5_55 sacks 12/27/2013 add hooks to Sean Santos's unit test frameworks, and begin to add CLM unit tests clm4_5_54 sacks 12/27/2013 update externals to cesm1_3_beta06 clm4_5_53 muszala 12/19/2013 refactor restart interfaces clm4_5_52 sacks 11/26/2013 turn on longwave radiation downscaling for glc_mec by default clm4_5_51 sacks 11/26/2013 rework downscaling of atm fields for glc_mec clm4_5_50 erik 11/24/2013 Bring in a bunch of b4b bugfixes, fix getregional script, start move of PTCLM to PTCLMmkdata tool clm4_5_49 muszala 11/16/2013 swenson anomaly forcing - part 1 clm4_5_48 muszala 11/14/2013 bug fixes for CLM dry deposition and MEGAN VOC emissions clm4_5_47 muszala 11/12/2013 fix Bug 1858 - AGDD now reset annually clm4_5_46 sacks 11/08/2013 remove zeroing out of slope for special landunits clm4_5_45 sacks 11/08/2013 refactor daylength calculation, and other minor changes clm4_5_44 sacks 11/08/2013 temporary hack to daylength initialization to provide baselines for the next tag clm4_5_43 sacks 11/06/2013 allocate memory for most landunits in every grid cell (needed for dynamic landunits) clm4_5_42 sacks 11/04/2013 fix bug 1857 for CLM4.5 - CNDV running temperature means are incorrect clm4_5_41 andre 10/30/2013 update scripts to convert clm4_5 CPP flags to namelist variables. clm4_5_40 muszala 10/24/2013 fix Bug 1752 - urban conductances depend on weights in an undesirable way clm4_5_39 muszala 10/23/2013 bug fix from santos - h2osoi_vol not passed to atmosphere model on restart clm4_5_38 sacks 10/18/2013 change irrigation variables to be pft-level clm4_5_37 muszala 10/10/2013 Modifications to bring clm up to date with major driver refactoring in drvseq5_0_01 clm4_5_36 sacks 10/04/2013 new surface datasets, and other minor fixes clm4_5_35 sacks 10/01/2013 get CLM running on edison clm4_5_34 erik 09/30/2013 Get PTCLM working, fix a few small bugs clm4_5_33 muszala 09/26/2013 clean up from mistakes in previous tag clm4_5_32 muszala 09/26/2013 bug fix tag - 1798, 1810 clm4_5_31 sacks 09/25/2013 fix bug 1820: incomplete conditional in CNSoyfix leads to buggy results and decomposition dependence clm4_5_30 sacks 09/24/2013 fix performance bug in decomposition initialization clm4_5_29 sacks 09/24/2013 fix threading in CLM4.5, and other misc fixes clm4_5_28 sacks 09/20/2013 fix FracH2oSfc bug clm4_5_27 sacks 09/20/2013 fix crop nyrs bug clm4_5_26 muszala 09/19/2013 water balance and SMS_Ly1.f19_g16.ICLM45BGCCROP fix clm4_5_25 erik 09/13/2013 Bring in Tony's changes to kick sno all the way up to the coupler layer, makes all CESM components more similar to each other clm4_5_24 sacks 09/03/2013 update externals to cesm1_3_beta02 or later clm4_5_23 muszala 08/22/2013 refactor to allow CH4 params. to be read from netcdf file and clean up clm4_5_20 clm4_5_22 muszala 07/30/2013 aux_clm testlist reorganization clm4_5_21 muszala 07/24/2013 ifdef and bounds refactor clm4_5_20 muszala 07/20/2013 refactor to allow CN and BGC params. to be read from netcdf file clm4_5_19 sacks 07/17/2013 fix setting of bd in iniTimeConst clm4_5_18 sacks 07/09/2013 rework urban indexing clm4_5_17 sacks 07/03/2013 misc cleanup and bug fixes clm4_5_16 sacks 07/02/2013 only run filters over 'active' points clm4_5_15 muszala 07/01/2013 complete associate refactor for pointers in clm4_5 source clm4_5_14 muszala 06/20/2013 preparation for associate refactor in clm4_5_15 clm4_5_13 andre 06/14/2013 hydrology reordering from Jinyun Tang clm4_5_12 muszala 06/13/2013 NoVS test, NAG mods and remove TWS from restart file clm4_5_11 sacks 06/11/2013 Change pct_pft and related surface dataset variables to be % of landunit clm4_5_10 muszala 06/10/2013 refactor clmtype clm4_5_09 muszala 06/04/2013 volr and vic fix, update mct and rtm clm4_5_08 muszala 06/03/2013 port for NAG compiler clm4_5_07 erik 05/31/2013 New spinup files for CLM45 AND RTM, work on PTCLM, turn drydep off by default, update externals clm4_5_06 erik 05/15/2013 A few small bug fixes, more updates to README files clm4_5_05 muszala 05/14/2013 hcru bug fixes clm4_5_04 erik 05/13/2013 Fix the previous broken tag clm4_5_03 erik 05/10/2013 Several bug fixes for release, urban and test single point surface datasets clm4_5_02 sacks 05/07/2013 make 'shared' tools directory, and other minor tools fixes clm4_5_01 muszala 05/06/2013 update externals clm4_5_00 erik 05/02/2013 Official end to CLM4.5 development for CLM offline clm4_0_81 bandre 04/29/2013 Charlie Koven's variable consolidation, cryoturbation and BSW CPP changes clm4_0_80 erik 04/26/2013 Bring Fang Li. Fire model into CLM4.5 science, update ALL CLM4.5 surface datasets, provide a working initial condition file for CLM45BGC@f19_g16-1850 clm4_0_79 muszala 04/24/2013 pftdyn, pft-phys*.nc and datm8 update clm4_0_78 muszala 04/23/2013 MEGAN fixes clm4_0_77 sacks 04/23/2013 fix carbon balance bug in transient runs with VERTSOI, and fix Soil Hydrology bug clm4_0_76 muszala 04/22/2013 spinup changes from Charlie Koven (part 1) clm4_0_75 muszala 04/19/2013 run propset clm4_0_74 muszala 04/17/2013 snow_depth changes, major scripts overhaul, bug fix for tools clm4_0_73 sacks 04/15/2013 update mksurfdata_map for CLM4.5, and other misc. updates, mainly to tools clm4_0_72 muszala 04/11/2013 maoyi bug fix for vic hydro clm4_0_71 muszala 04/10/2013 compsets refactoring by mvertens clm4_0_70 muszala 04/01/2013 bring in vic hydrology clm4_0_69 muszala 03/26/2013 remove hydro reorder, volr and esmf mods clm4_0_68 erik 03/16/2013 Fix some issues in mksurfdata_map for generation of ne120np surface data file. Put error back in CLM if weights don't sum to 100. Add in Keith's photosynthesis change for CLM45. clm4_0_67 muszala 03/12/2013 Jinyun photosynthesis and hydrology reorder clm4_0_66 sacks 03/07/2013 turn off subgrid topography snow parameterization for glc_mec landunits clm4_0_65 sacks 03/07/2013 back out Machines external to get more tests to pass, especially IG clm4_0_64 muszala 03/06/2013 update externals. fixes 40/45 intial condition problem clm4_0_63 muszala 03/04/2013 bug 1635 fix - 4_0 CN bug clm4_0_62 sacks 02/24/2013 add active flags, change subgrid weighting convention, other misc fixes clm4_0_61 muszala 02/20/2013 rtm, drv and clm mods: tws, olr, r01 rdric file and SoilHydroMod clm4_0_60 erik 02/11/2013 Bring CLM4.5 code from clm45sci branch to trunk as an option set at configure time clm4_0_59 mvertens 12/20/2012 restructure clmtype and all pointer references, new directory structure clm4_0_58 erik 12/14/2012 Uncomment us20 and wus12 datasets, more testing to: bluefire, yellowstone, frankfurt clm4_0_57 muszala 11/30/2012 update trunk with release mods, some rtm fixes clm4_0_56 sacks 11/27/2012 fix s2x tsrf, add s2x diagnostics clm4_0_55 muszala 11/14/2012 bring in flooding capability clm4_0_54 erik 10/09/2012 Fix esmf for carma field, fix some CLM_USRDAT issues clm4_0_53 erik 10/03/2012 Update to fsurdat, fpftdyn, finidat datasets, new high resolution organic/fmax/glacier raw datasets clm4_0_52 sacks 09/27/2012 new pct_glacier raw data file clm4_0_51 muszala 09/26/2012 bug fixes, pio performance and SCRIP files clm4_0_50 muszala 09/21/2012 testing of clm and new rof component clm4_0_49 erik 09/16/2012 Move clm testing to use CESM test framework clm4_0_48 muszala 09/11/2012 bug fixes, xFail to tests and normalize test output for CLM clm4_0_47 muszala 08/23/2012 bug fixes clm4_0_46 muszala 08/08/2012 R01 support and update externals clm4_0_45 sacks 07/20/2012 fix virtual columns; new urban mksurfdata_map clm4_0_44 erik 07/09/2012 Add wrf resolutions, update externals to cesm1_1_beta15, all components use build-namelist now clm4_0_43 sacks 04/06/2012 Add diagnostic fields, modify some existing history fields clm4_0_42 erik 03/27/2012 Bring in Francis Vitt's MEGAN changes. clm4_0_41 erik 03/13/2012 Bring rmfmesh/rtmmap branches to trunk clm4_0_40 erik 02/16/2012 Back out update to new T31 surface datasets clm4_0_39 erik 02/01/2012 Bring newgrid branch to trunk clm4_0_38 erik 01/23/2012 Fix f09 surface datasets clm4_0_37 erik 09/26/2011 Fix unstructured grids history files clm4_0_36 erik 09/22/2011 Comment out RTM mapping files for f09 and f19 clm4_0_35 erik 09/13/2011 Bring in Mariana's non2D grid branch to trunk, enabling HOMME grids: ne30np4/ne120np4 clm4_0_34 erik 08/18/2011 Bring tcens branch to trunk, fix a few issues clm4_0_33 erik 07/25/2011 Move changes on release branch over to trunk clm4_0_32 erik 05/19/2011 Make I1850SPINUPCN compset use MOAR data, various bug fixes, work on test lists clm4_0_31 erik 05/13/2011 Fix answers for transient_CN, fix interpinic clm4_0_30 erik 05/11/2011 New finidat/fsurdat files for T31 clm4_0_29 erik 05/05/2011 Backout interpinic changes to one that works clm4_0_28 erik 05/03/2011 Remove DUST/PROGSSLT in land coupler layer, update driver and scripts clm4_0_27 erik 05/02/2011 Move crop branch over to trunk clm4_0_26 erik 03/23/2011 Update externals, driver update changes answers, drydep changes from fvitt, fix bugs clm4_0_25 erik 03/22/2011 Always output restart-history files add more meta-data to them, fix urbanc_alpha and 2.5x3.33 datasets, Changes from Keith O on SNOWLIQ/SNOWICE clm4_0_24 erik 02/09/2011 Fix mksurfdata and add ability to override soil_fmax clm4_0_23 erik 02/03/2011 Add in new glacier-MEC use-cases clm4_0_22 erik 01/20/2011 Move coupler field indicies to clm, move cpl_* directories up a level, add the cpl_share directory clm4_0_21 jedwards 01/12/2011 Remove includes, finish PIO transition clm4_0_20 erik 01/11/2011 Update for ESMF metadata, update doc. from release branch, bug fixes (doc of qflx_evap_tot, threading CNDV, aer/ndepregrid) clm4_0_19 erik 12/08/2010 Bring irrigation branch to the trunk clm4_0_18 erik 11/21/2010 Fix a problem with the clm template, update scripts version to fix bug with linking with ESMF clm4_0_17 erik 11/20/2010 Update to externals that change answers to roundoff, use drv pio namelist, add in T341 datasets clm4_0_16 erik/mverten 10/27/2010 Fix downscaling roundoff difference for same-grids by copying scale factor when needed clm4_0_15 erik/mverten 10/24/2010 Move pio branch to trunk clm4_0_14 erik 10/19/2010 Fix finidat file for T31 sim_year=2000 cases clm4_0_13 erik 10/16/2010 Bring in PTCLM branch, add in T31 finidat file and turn off ice_runoff for T31 clm4_0_12 erik 09/10/2010 Add U10 to history, cesm1_0_rel06 updates, PTCLM02 updates (except mksurfdata), remove ndepdat/dyn/faerdep clm4_0_11 erik 08/27/2010 New files for rcp6, fix MPI bug, update externals clm4_0_10 erik 08/04/2010 Update doc to cesm_rel05, bug-fixes, fix issues for single-point, mksurfdata/getregional scripts clm4_0_09 erik 06/14/2010 Fix some small issues, update documentation, and externals clm4_0_08 erik 06/04/2010 Snow hydrology bug fix from Keith and Dave clm4_0_07 erik 06/03/2010 Some cleanup/fix bugs, add RTM var, add albice to namelist, allow last-millenium in mksurfdata, allow setting of datm_presaero in clm test-suite clm4_0_06 erik 05/26/2010 Update gglc to cism clm4_0_05 erik 05/25/2010 Move Nitrogen deposition stream branch to trunk clm4_0_04 erik 05/20/2010 New namelist items: ice_runoff, scaled_harvest, carbon_only, new RTM hist vars, new finidat files, update esmf interface, turn off aerosol read quicker clm4_0_03 erik 05/17/2010 Changes from Francis for VOC and drydep clm4_0_02 erik 05/13/2010 Make sure dtime is initialized, so that answers are consistently the same as clm4_0_00 clm4_0_01 erik 05/11/2010 Move glacier multiple elevation class branch to the trunk so that we can work with the active glacier model clm4_0_00 erik 05/04/2010 Update to datm8, redirect aquifer overflow to drainage, add gx3v7 masks, script to extract regional datasets, add harvesting for CN, modify shrubs, include urban model, ice stream for snowcapping, new build-namelist system, scale solar by solar zenith angle in datm, deep soil with bedrock at bottom, organic matter in soils, SNICAR for snow radiation, sparce dense aero, snow cover changes clm3_8_00 erik 05/04/2010 Get future scenarios working, finalize documentation, bring in MEGAN VOC and CNDV, simplify, mksurfdata optimization, fix bugs: snow enthalpy, BMOZ, pergro, use pft weights from fsurdat NOT finidat clm3_7_15 erik 04/27/2010 Finish User's Guide, surfdata files for urban-1pt, fix mksurfdata ifort bugs, work with testing clm3_7_14 erik 04/08/2010 Fix rcp=2.6/4.5 1-degree fndepdyn filenames clm3_7_13 erik 04/08/2010 Add in missing rcp=2.6/6 use-cases, and fix syntax errors in the namelist_defaults file clm3_7_12 erik 04/08/2010 rcp=2.6/4.5 datasets for fndepdyn and aerdepdat, fix some minor issues, new 1pt urban surfdata files clm3_7_11 erik 04/07/2010 qtr-degree and T85 surfdata, rcp=2.6/4.5 datasets, doc updates clm3_7_10 erik 03/22/2010 Fix drydep so that BMOZ case will work clm3_7_09 erik 03/21/2010 Fix snow enthalpy bug, cndv datasets, various fixes clm3_7_08 mvertens 03/12/2010 Removal of check for weights if dynamic land use is used clm3_7_07 erik 03/10/2010 New finidat datasets for 1-deg, 2-deg, and abort if weights from finidat/fsurdat files are too different, and use fsurdat files as truth clm3_7_06 erik 03/10/2010 Bring cndv branch to trunk clm3_7_05 erik 02/24/2010 Bring VOC branch source code to trunk clm3_7_04 erik 02/17/2010 Bring VOC branch (vocemis-drydep18_clm3_7_03) tools, testing, and build to trunk (everything other than VOC code changes) clm3_7_03 erik 02/10/2010 Add in more future scenario datasets, new history fields from Keith clm3_7_02 erik 02/06/2010 Start adding in new rcp=8.5 datasets, remove some junk, change some env_conf variables, add user_nl_clm clm3_7_01 erik 01/29/2010 OpenMP fix for pftdyn, start adding in rcp's, update ndeplintInterp.ncl script clm3_7_00 erik 01/22/2010 Update to datm8, redirect aquifer overflow to drainage, add gx3v7 masks, script to extract regional datasets, add harvesting for CN, modify shrubs, include urban model, ice stream for snowcapping, new build-namelist system, scale solar by solar zenith angle in datm, deep soil with bedrock at bottom, organic matter in soils, SNICAR for snow radiation, sparce dense aero, snow cover changes clm3_6_64 erik 01/22/2010 Update documentation and README/Quickstart files, set NetCDF large-file format on by default in template, update pio, update some fsurdat files to vocemis-drydep versions, add 2.5x3.33_gx3v7 frac file, make gx3v7 default for 4x5 res clm3_6_63 erik 01/09/2010 Get answers to be identical with ccsm4_0_beta38 for 1 and 2 degree transient cases clm3_6_62 erik 01/08/2010 Fix startup of PFT transient cases so properly use data from pftdyn file rather than finidat file clm3_6_61 erik 01/07/2010 Comment out endrun on finidat and fsurdat weights being incomptable, and go back to using finidat weights clm3_6_60 erik 01/05/2010 Fix clm template clm3_6_59 erik 01/05/2010 Update to datm8, fix so wts used are from fsurdat file NOT finidat file clm3_6_58 erik 12/08/2009 Fix rpointer, correct units for export of nee, start adding testing for intrepid clm3_6_57 erik 11/20/2009 Redirect aquifer overflow to drainage, so doesn't end up in ocean clm3_6_56 erik 11/10/2009 New ndepdat and ndepdyn datasets clm3_6_55 erik 11/05/2009 Fix tool to create Nitrogen deposition datasets, and change configure to use CCSM Makefile as source for TopLevel Makefile clm3_6_54 erik 10/28/2009 Allow comp_intf to change on ccsm build, reduce default hist fields, start adding 2.5x3.33, start adding VOC fsurdat datasets, new finidat files for f09 and f19 clm3_6_53 erik 09/22/2009 Fix so that T31_gx3v7 file is actually included clm3_6_52 erik 09/17/2009 Add T31_gx3v7 support, remove forganic, read from fsurdat, add script to extract regional datasets, work with CN output, add more urban/rural fields clm3_6_51 erik 09/01/2009 Update fndepdyn and aerdep datasets (f02,f05,f09,f10) (1850,2000) and f09, f10 transient (1850-2000) clm3_6_50 erik 08/28/2009 Fix ncl regridding scripts so that NO missing values are allowed for aerosol and nitrogen deposition clm3_6_49 erik 08/25/2009 Fix ncl interpolation scripts, update externals, turn on CLM_CCSM_BLD for bluefire,jaguar, ESMF3 compliance clm3_6_48 erik 08/12/2009 New aerosol/nitrogen deposition datasets, mksurfdata work, scm work, clm_usr_name option to build-namelist clm3_6_47 erik 08/03/2009 Fix hybrid bug for dynpft case, update externals clm3_6_46 erik 07/22/2009 Get more tests to work/document them, add use cases for 1850_control, 2000_control, and 20thC_transient, straighten out single-point grids, Listen to LND_CDF64 env variable from template, remove CLM_ARB_IC. clm3_6_45 erik 07/10/2009 Remove inconsistent finidat file in clm3_6_44 clm3_6_44 erik 07/09/2009 Fix C13 bug, update scripts, drv, datm. Add domain files for idmap atm-ocn grids for datm. Remove SEQ_MCT, add new ESMF env vars to template. Work with ndeplintInterp clm3_6_43 erik 06/10/2009 Fix pftdyn bug, enable 1D primary hist files, fix time-const3D output, fix template bug, enable cpl_esmf/cpl_mct clm3_6_42 erik 06/02/2009 Bring CN Harvest branch to trunk clm3_6_41 kauff 05/29/2009 shrub mods, abort if nthreads > 1 (temporary, wrt bugz #965) clm3_6_40 erik 05/28/2009 Fix openMP bug, add fndepdyn ncl script, fix interpinic for urban, add mkharvest to mksurfdata, new spinups, turn CLAMP on for CASA or CN clm3_6_39 erik 05/07/2009 Bug fix for script version and maxpatchpft back to numpft+1 clm3_6_38 erik 05/06/2009 New fsurdat for other resolutions, bug-fixes, deep wetlands to bedrock, new spinups for 1.9x2.5 1850, 2000 clm3_6_37 erik 04/27/2009 Update faerdep dataset for 1.9x2.5 to point to version cice is using for 1850 and 2000 clm3_6_36 erik 04/27/2009 Handle transient aersol, make maxpatchpft=numpft+1 default, new datasets for 1.9x2.5 and 0.9x1.25, change doalb clm3_6_35 erik 04/20/2009 Fix major logic bug in mksurfdata clm3_6_34 oleson 04/19/2009 Fix bangkok urban bug clm3_6_33 erik 04/16/2009 Bring in dynpft changes from cbgc branch clm3_6_32 erik 04/15/2009 Add irrigation area to mksrfdata, fix high-res and pftdyn problems clm3_6_31 erik 04/01/2009 New surface datasets for 1850,2000, support for 0.9x1.25_gx1v6, urban always on. New pft-physiology file. Update scripts so remove some CLM_ env_conf vars. Fix CN for urban/pftdyn. clm3_6_30 oleson 03/19/2009 Fix urban roof/wall layers clm3_6_29 oleson 03/19/2009 CN SAI, CN testing fix, rad step size fix clm3_6_28 oleson 03/17/2009 Fix permission denied error when reading surface dataset clm3_6_27 oleson 03/16/2009 Urban model changes and FGR12 fix clm3_6_25 dlawren 03/13/2009 Daylength control on Vcmax, 1%Lake,wetland,glacier in mksrfdat, remove ELEVATION in surface data file clm3_6_24 oleson 03/09/2009 Fix urban testing and some history field changes clm3_6_23 oleson 03/08/2009 Prune history fields and change to snowdp threshold for solar radiation penetration into snow clm3_6_21 oleson 03/04/2009 History file changes and finish testing on tags clm3_6_19 and clm3_6_20 clm3_6_19 oleson 02/27/2009 Changes to urban model and urban surface data clm3_6_17 oleson 02/26/2009 Urban model changes and mksurfdata changes to incorporate urban data clm3_6_16 erik 02/12/2009 Multiple elevation classes on surface dataset, urban fixes, mpi-serial and testing fixes clm3_6_15 erik 01/19/2009 Bring clm36sci branch to the trunk clm3_6_14 erik 10/10/2008 Fix some global urban issues, fix pftdyn, really get compile-only option working in testing clm3_6_13 erik 10/01/2008 Update to new version of cpl7 scripts and build, update externals for versions needed for clm36sci branch, add new CASA tests clm3_6_12 erik 09/21/2008 Fix restarts for urban, add capability to do global urban experiments, add in new forcing height changes clm3_6_11 dlawren 08/26/2008 Ice stream for snow capped regions clm3_6_10 tcraig 08/15/2008 extend rtm tracer, ascale for tri-grids, AIX O3 to O2 clm3_6_09 erik 08/11/2008 Fix clm.cpl7.template to run hybrid and branch cases clm3_6_08 erik 08/06/2008 Fix bugs, and build changes for inputdata repo clm3_6_07 erik 07/08/2008 Implement new build namelist system from Vertenstein/Eaton, bluefire, and BGP updates clm3_6_06 erik 05/30/2008 Small fix needed for ccsm4_alpha30 (use gx1v5 for some resolutions when OCN_GRID==ATM_GRID) clm3_6_05 erik 05/27/2008 Fix to compile with PGI-6, update scripts, fix cpl7.template for new scripts LND_GRID, fix 2.65x3.33 frac dataset. clm3_6_04 erik 05/20/2008 Remove all MCT permutes, fix cpl7 script issues, remove offline mode, add ability to run over a range of years clm3_6_03 erik 05/08/2008 Fix so listen to next_swcday to calculate albedo rather than using irad clm3_6_02 erik 03/25/2008 Minor fix in configure remove perl5lib version under models/lnd/clm/bld clm3_6_01 erik 03/20/2008 40 m forcing height changes for clm clm3_6_00 erik 03/20/2008 Fully implement sequential-ccsm mode, upgrade configure, build-namelist and testing, upgrade interpolation tool, add mkdatadomain, write to iulog rather than 6 explicitly, SCAM update, Update datasets, add archiving, and build-streams, add in point version of Urban model, change directory structure to mimic CCSM clm3_5_20 erik 03/17/2008 Bug fixes before spinning off clm3_6_00, put in changes from ccsm4a01_clm3_5_18 to ccsm4a04_clm3_5_18 clm3_5_19 erik 03/06/2008 Change directory structure to mimic CCSM, fix so no NaNS on BGC interpinic output, new half degree CN clmi dataset clm3_5_18 erik 02/21/2008 Update to latest seq-ccsm4.alpha tag clm3_5_17 erik 02/06/2008 Merge Tony Craig's FMI branch fmi12_clm3_5_16 to the clm trunk clm3_5_16 erik 01/28/2008 Get point version of Urban code onto trunk (urban code can not restart) clm3_5_15 erik 12/10/2007 Fix interpinic for half degree grid, add in large-file support, allow configure to work with ccsm directory structure clm3_5_14 erik 11/27/2007 Use build-streams, and archiving, multiple bug-fixes clm3_5_13 erik 11/16/2007 Update xml file with file needed for ccsm3_5_beta18 clm3_5_12 erik 11/08/2007 Tag with new files needed for ccsm3_5_beta17 clm3_5_11 erik 09/28/2007 Update datasets in the DefaultCLM file for 0.23x0.31, 0.47x0.63, 0.9x1.25 and add fndepdyn file for 1.9x2.5 clm3_5_10 jet 09/18/2007 SCAM update clm3_5_09 erik 08/31/2007 Change configure to NOT have csm_share code for ccsm_con option, and add in 1x1.25 file, and update datm7 and csm_share clm3_5_08 tcraig 08/20/2007 convert 6 to iulog in logfile, updates for I/O clm3_5_07 erik 08/17/2007 Add mkdatadomain tool, add cprnc and perl5lib as externals clm3_5_06 erik 08/10/2007 Update: interpolation, testing, script namelist build, and scripts. Fix bugs, and fix possible clm3_5_05 tcraig 07/11/2007 seq clm mods and first hist refactor mods clm3_5_04 mvertens 06/05/2007 lnd_comp_mct.F90 change to work with sequential diagnostics clm3_5_03 tcraig 05/23/2007 reduce memory, partial I/O refactor, downscaling implementation clm3_5_02 mvertens 05/22/2007 put in hourly coupling with sequential driver clm3_5_01 erik 05/16/2007 Move newcn06 branch to trunk clm3_5_00 erik 05/03/2007 New surface datasets, improved canopy integration, and various improvements to Hydrology