clm4.5: clm5.0: clm5.1: clm6.0: Satellite phenology: Satellite phenology with VIC hydrology: Satellite phenology without anthropomorphic influences BGC (vert. resol. CN and methane): BGC (vert. resol. CN and methane) with prognostic crop: BGC (vert. resol. CN and methane) without anthropomorphic influences: FATES (Functionally Assembled Terrestrial Ecosystem Simulator) Ecosystem Demography model: Satellite phenology with FATES (Functionally Assembled Terrestrial Ecosystem Simulator) Ecosystem Demography model: BGC (vert. resol. CN and methane) with dynamic vegetation: BGC (vert. resol. CN and methane) with dynamic vegetation and prognostic crop: BGC (vert. resol. CN and methane) with prognostic crop, with modifications appropriate for CMIP6 DECK experiments: BGC (vert. resol. CN and methane) with prognostic crop, with modifications appropriate for CMIP6 WACCM DECK experiments: NWP configuration with satellite phenology: NWP configuration with BGC and CROP: char clm,ctsm UNSET clm ctsm case_comp env_case.xml Name of land component char on,off off build_component_ctsm env_build.xml Flag to enable building the LILAC cap and coupling code char run_component_ctsm env_run.xml Tuning parameters and initial conditions should be optimized for what CLM model version and what meteorlogical forcing combination? Options for all combinations of CLM physics and atm forcing are given. The buildnml and namelist_defaults will narrow it down to the ones that have been tuned. The buildnml will also warn you if a tuning combination is based on another set. Atm forcing options: CRUv7 GSWP3 CAM4.0 CAM5.0 CAM6.0 CAM7.0 QIAN (not tuned) 1PT (not tuned) NLDAS2 (not tuned) ERA5 (not tuned) Other atm forcing options are invalid to run CLM and will result in an error. UNSET clm5_0_cam6.0,clm5_0_cam7.0,clm5.0_cam5.0,clm5.0_cam4.0,clm5_0_GSWP3v1,clm5_0_CRUv7,clm5_0_QIAN,clm5_0_1PT,clm5_0_NLDAS2,clm5_0_ERA5,clm4_5_CRUv7,clm4_5_GSWP3v1,clm4_5_QIAN,clm4_5_cam6.0,clm4_5_cam7.0,clm4_5_cam5.0,clm4_5_cam4.0,clm4_5_1PT,clm4_5_NLDAS2,clm4_5_ERA5,clm5_1_CRUv7,clm5_1_GSWP3v1,clm5_1_cam6.0,clm5_1_QIAN,clm5_1_1PT,clm5_1_NLDAS2,clm5_1_ERA5,clm6_0_CRUv7,clm6_0_GSWP3v1,clm6_0_cam6.0,clm6_0_cam7.0,clm6_0_cam5.0,clm6_0_cam4.0,clm6_0_QIAN,clm6_0_1PT,clm6_0_NLDAS2,clm6_0_ERA5 clm4_5_CRUv7 clm4_5_CRUv7 clm4_5_CRUv7 clm4_5_GSWP3v1 clm4_5_cam6.0 clm4_5_cam4.0 clm4_5_cam5.0 clm4_5_cam7.0 clm4_5_cam6.0 clm4_5_QIAN clm4_5_QIAN clm4_5_1PT clm4_5_NLDAS2 clm4_5_ERA5 clm5_0_CRUv7 clm5_0_CRUv7 clm5_0_GSWP3v1 clm5_0_GSWP3v1 clm5_0_cam6.0 clm5_0_cam4.0 clm5_0_cam5.0 clm5_0_cam7.0 clm5_0_cam6.0 clm5_0_QIAN clm5_0_QIAN clm5_0_1PT clm5_0_NLDAS2 clm5_0_ERA5 clm5_1_GSWP3v1 clm5_1_GSWP3v1 clm5_1_cam6.0 clm5_1_cam4.0 clm5_1_cam5.0 clm5_1_cam6.0 clm6_0_CRUv7 clm6_0_CRUv7 clm6_0_GSWP3v1 clm6_0_GSWP3v1 clm6_0_cam6.0 clm6_0_cam4.0 clm6_0_cam5.0 clm6_0_cam7.0 clm6_0_cam6.0 clm6_0_QIAN clm6_0_QIAN clm6_0_1PT clm6_0_NLDAS2 clm6_0_ERA5 INVALID_DATM_FORCING_FOR_RUNNING_CTSM INVALID_DATM_FORCING_FOR_RUNNING_CTSM INVALID_DATM_FORCING_FOR_RUNNING_CTSM INVALID_DATM_FORCING_FOR_RUNNING_CTSM char clm4_5,clm5_0,clm5_1,clm6_0 UNSET clm4_5 clm5_0 clm5_1 clm6_0 run_component_ctsm env_run.xml Overall physics version to use. This sets the default values for many different namelist options. This is typically set by the compset. char clm,nwp clm nwp run_component_ctsm env_run.xml Sets CLM default namelist options related to model configuration. clm: Configuration used for climate applications (CLM) nwp: Configuration used for numerical weather prediction applications char standard,fast standard fast run_component_ctsm env_run.xml Sets CLM default namelist options related to model structure. standard: Standard model structure, allowing for more subgrid heterogeneity, deeper soil, etc., at the cost of slower speeds. fast: Simplified model structure, achieving faster speeds at the cost of less subgrid heterogeneity, shallower soil, etc. char UNSET 2010_control 2000_control 1850_control 1850_noanthro_control 1850_noanthro_control 20thC_transient 1850-2100_SSP5-8.5_transient 1850-2100_SSP1-2.6_transient 1850-2100_SSP3-7.0_transient 1850-2100_SSP5-3.4_transient 1850-2100_SSP2-4.5_transient 1850-2100_SSP1-1.9_transient 1850-2100_SSP4-3.4_transient 1850-2100_SSP4-6.0_transient 1850-2100_SSP5-8.5_transient 20thC_transient 1850-2100_SSP5-8.5_transient run_component_ctsm env_run.xml CLM namelist use_case. Determines the use-case that will be sent to the CLM build-namelist utility. This is normally set by the component set. This is an advanced flag and should only be used by expert users. char -bgc sp -bgc bgc -bgc bgc -crop -bgc fates -no-megan -bgc fates -no-megan -bgc bgc -dynamic_vegetation -bgc bgc -dynamic_vegetation -crop -bgc sp -vichydro -bgc bgc -dynamic_vegetation -bgc bgc -dynamic_vegetation -crop -bgc sp -vichydro run_component_ctsm env_run.xml CLM build-namelist options char constant,diagnostic,prognostic constant diagnostic diagnostic prognostic diagnostic diagnostic run_component_ctsm env_run.xml Determines how CLM will determine where CO2 is set. If value is constant, it will be set to CCSM_CO2_PPMV, if value is either diagnostic or prognostic, the atmosphere model MUST send it to CLM. CLM_CO2_TYPE is normally set by the specific compset, since it HAS to be coordinated with settings for the atmospheric model. Do not modify this variable. If you want to modify for your experiment, use your own user-defined component set This is an advanced flag and should only be used by expert users. char run_component_ctsm env_run.xml CLM-specific namelist settings for -namelist option in the CLM build-namelist. CLM_NAMELIST_OPTS is normally set as a compset variable and in general should not be modified for supported compsets. It is recommended that if you want to modify this value for your experiment, you should use your own user-defined component sets via using create_newcase with a compset_file argument. This is an advanced flag and should only be used by expert users. char on,off off run_component_ctsm env_run.xml Turn on any settings for accellerating the model spinup. char UNSET run_component_ctsm env_run.xml Resolution name for user-created resolutions. This is especially used for single point and regional resolutions created via subset_data from the global datasets. This should be set when you use CLM_USRDAT as the grid to create_newcase. The default value is UNSET. For NEON cases, this can be set to either NEON or NEON.PRISM, the latter of which would use PRISM precipitation instead of the default NEON precipitation. NEON cases then also use the variable NEONSITE to specify the exact site. char UNSET run_component_ctsm env_run.xml Directory name for user-created surface, landuse, and datm datasets. This is used as an argument in user_mods namelists (e.g. user_nl_clm, user_nl_datm_streams) generated with the subset_data script. Users should modify this variable (in shell_commands or elsewhere) to set the location of user-created data. The default value is UNSET. char on,off off run_component_ctsm env_run.xml Flag to the CLM build-namelist command to force CLM to do a cold start (finidat will be set to blanks). A value of on forces the model to spin up from a cold-start (arbitrary initial conditions). Setting this value in the xml file will take precedence over any settings for finidat in the $CASEROOT/user_nl_ctsm file. char $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/fates_sp $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/fates_sp $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/cmip6_deck $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/cmip6_nociso_deck $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/cmip6_waccm_deck $COMP_ROOT_DIR_LND/cime_config/usermods_dirs/cmip6_waccm_nociso_deck run_component_ctsm env_case.xml User mods to apply to specific compset matches. char ABBY,BLAN,CPER,DEJU,GRSM,HEAL,KONA,LENO,NIWO,ONAQ,PUUM,SERC,SRER,TALL,TREE,WOOD, BARR,BONA,DCFS,DELA,GUAN,JERC,KONZ,MLBS,NOGP,ORNL,RMNP,SJER,STEI,TEAK,UKFS,WREF, BART,CLBJ,DSNY,HARV,JORN,LAJA,MOAB,OAES,OSBS,SCBI,SOAP,STER,TOOL,UNDE,YELL, NEON_PRECIP.ABBY,NEON_PRECIP.BLAN,NEON_PRECIP.CPER,NEON_PRECIP.DEJU,NEON_PRECIP.GRSM, NEON_PRECIP.HEAL,NEON_PRECIP.KONA,NEON_PRECIP.LENO,NEON_PRECIP.NIWO,NEON_PRECIP.ONAQ, NEON_PRECIP.PUUM,NEON_PRECIP.SERC,NEON_PRECIP.SRER,NEON_PRECIP.TALL,NEON_PRECIP.TREE, NEON_PRECIP.WOOD,NEON_PRECIP.BARR,NEON_PRECIP.BONA,NEON_PRECIP.DCFS,NEON_PRECIP.DELA, NEON_PRECIP.GUAN,NEON_PRECIP.JERC,NEON_PRECIP.KONZ,NEON_PRECIP.MLBS,NEON_PRECIP.NOGP, NEON_PRECIP.ORNL,NEON_PRECIP.RMNP,NEON_PRECIP.SJER,NEON_PRECIP.STEI,NEON_PRECIP.TEAK, NEON_PRECIP.UKFS,NEON_PRECIP.WREF,NEON_PRECIP.BART,NEON_PRECIP.CLBJ,NEON_PRECIP.DSNY, NEON_PRECIP.HARV,NEON_PRECIP.JORN,NEON_PRECIP.LAJA,NEON_PRECIP.MOAB,NEON_PRECIP.OAES, NEON_PRECIP.OSBS,NEON_PRECIP.SCBI,NEON_PRECIP.SOAP,NEON_PRECIP.STER,NEON_PRECIP.TOOL, NEON_PRECIP.UNDE,NEON_PRECIP.YELL, PRISM_PRECIP.ABBY,PRISM_PRECIP.BLAN,PRISM_PRECIP.CPER,PRISM_PRECIP.GRSM, PRISM_PRECIP.KONA,PRISM_PRECIP.LENO,PRISM_PRECIP.NIWO,PRISM_PRECIP.ONAQ, PRISM_PRECIP.SERC,PRISM_PRECIP.SRER,PRISM_PRECIP.TALL,PRISM_PRECIP.TREE, PRISM_PRECIP.WOOD,PRISM_PRECIP.DCFS,PRISM_PRECIP.DELA,PRISM_PRECIP.JERC, PRISM_PRECIP.KONZ,PRISM_PRECIP.MLBS,PRISM_PRECIP.NOGP,PRISM_PRECIP.ORNL, PRISM_PRECIP.RMNP,PRISM_PRECIP.SJER,PRISM_PRECIP.STEI,PRISM_PRECIP.TEAK, PRISM_PRECIP.UKFS,PRISM_PRECIP.WREF,PRISM_PRECIP.BART,PRISM_PRECIP.CLBJ, PRISM_PRECIP.DSNY,PRISM_PRECIP.HARV,PRISM_PRECIP.JORN,PRISM_PRECIP.MOAB, PRISM_PRECIP.OAES,PRISM_PRECIP.OSBS,PRISM_PRECIP.SCBI,PRISM_PRECIP.SOAP, PRISM_PRECIP.STER,PRISM_PRECIP.UNDE,PRISM_PRECIP.YELL, run_component_ctsm env_run.xml Name of site for NEON tower data char v1,v2,v3,latest latest run_component_ctsm env_run.xml Version id of Neon data ========================================= CLM naming conventions ========================================= note: [^_]* means match zero or more of any character BUT an underbar. (in other words make sure there is NOT a underbar before the string afterwards)